Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0909 ATGAAACCCAATCTCGTCCCATCAGATTCTCAAAGAATCCGAGCCGTTAAAATAGTTAGAGGCTTTCAGGAGCTCGCTTATCCTCCACAACCACTATCTCCCTCTCCTTCCCCAACACTGAACTCTTCTCCTATGGCCTTGTCAAGCCCACAAATTCAAAGATTCCTCTTAAACAAGCTCCATGGCCGCTCCTCTTCCAGTAATAGCATCCGCAGAAATAGCTTTACCGCCACAAGCAGAGGCCGATGCTGCTCTGCCATAGCCATTGATGCCCCTTCGTCGTTGACTGACGTGACGGGTATAAGATGGGGATCCATTGCCTTGCAGGGTCTTCGGGAAGAGATGGAAGATGCTATTATTGTTCGTCCTGATGGCCTCGATGGCTTCTCCTTCGCCGCTGTGTTTGATGGCCATGGAGGATTTGCCTCCGTCGAGTTCCTCAGGGATGAACTGTACAAGGAGTGTCTCGCAGCTTTACAAGGTGGATTGCTATTGGGTAGAAAAGATTTCCAAGCCATTAGGGCAGCATTAGAGGAGGCATTTGTCAATGCTGATACAAGTTTGTTAAAACAGCTTGAAATGAATGGAGAGGAGGACGAATCTGGTGCTACCGCAACTGCTGTGTTCATTGGAGATGATAAGCTCCTCATTTCACATATAGGTGACTCATCTGTGGTTCTAAGCAGATCTGGAAAAGCAGAAGTGCTGACTAGTCCTCATCGACCATATGGGAACAATAAAACCTCTCTGCAAGAAATTAAAAGAATCAGAGATGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGCGCATTTGGGGACTTGCGATTCAAAACAAAAAAGAATGAGATGCTGAGGAAAGGGGTTGAGGAAGGAAGATGGTCAGAAAAATATATTTCTCGTGTACAGCTCAACAGTGACTTGGTCATTGCATGTCCTGATATTTATCAAGTAGCTCTTGGCTCGGATGCAGAATTTGTAGTCTTAGCATCTGATGGCTTATGGGATTACATGAGCAGCTCTGATGCAGTTTCATTTGTAAGGGATCAGCTTAGAAAGCATGGCAATATTCAGCTAGCTTGTGAAGCTCTTGCACAAGCAGCTCTTGACCGACGCACACAGGATAATGTCAGCATCATAATTGCTGATTTAGGGCGGACAGACTGGCAGAACTTGCCATTGCAGCAACAGAATGTTATATATGAATTGGTTCAAGCTCTGGCGACCATTGGAATTGTGTCACTTGGAATTTGGTTTTCATCCCATATTTTGTTATGA 1296 0.4522 MKPNLVPSDSQRIRAVKIVRGFQELAYPPQPLSPSPSPTLNSSPMALSSPQIQRFLLNKLHGRSSSSNSIRRNSFTATSRGRCCSAIAIDAPSSLTDVTGIRWGSIALQGLREEMEDAIIVRPDGLDGFSFAAVFDGHGGFASVEFLRDELYKECLAALQGGLLLGRKDFQAIRAALEEAFVNADTSLLKQLEMNGEEDESGATATAVFIGDDKLLISHIGDSSVVLSRSGKAEVLTSPHRPYGNNKTSLQEIKRIRDAGGWIVNGRICGDIAVSRAFGDLRFKTKKNEMLRKGVEEGRWSEKYISRVQLNSDLVIACPDIYQVALGSDAEFVVLASDGLWDYMSSSDAVSFVRDQLRKHGNIQLACEALAQAALDRRTQDNVSIIIADLGRTDWQNLPLQQQNVIYELVQALATIGIVSLGIWFSSHILL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0909 431 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Bisa09g0909 431 CDD PP2Cc 101 390 IPR001932 -
Bisa09g0909 431 SMART PP2C_4 92 388 IPR001932 -
Bisa09g0909 431 Gene3D - 101 396 IPR036457 -
Bisa09g0909 431 PANTHER PROTEIN PHOSPHATASE 2C 76 388 IPR015655 GO:0004722|GO:0006470
Bisa09g0909 431 Pfam Protein phosphatase 2C 104 383 IPR001932 -
Bisa09g0909 431 ProSiteProfiles PPM-type phosphatase domain profile. 102 390 IPR001932 -
Bisa09g0909 431 SUPERFAMILY PP2C-like 98 391 IPR036457 -
Bisa09g0909 431 FunFam Protein phosphatase 2C 57 101 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0909 Bisa-ChrBisa09 13138309 13144342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0909 45 367 PP2C-type Phosphatase Gene Family AT4G27800 62.154 1.41e-145 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0909 09 13138309 13144342 Bisa09g0909 09 13138309 13144342 ECH