Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0886 ATGGCGGGTTCGTCACAGACTAAGTCCTTGCAAGACTTGTTATTATATGCAGCGAGCGCGGCTCTGAGTTGCTTGGTCTTGTTTGTCGGGCTCCGACAACTCGACCCGAATCGTGAGGCATCTAAGAGAGCTCTTGAACACAAGAAAGAGATAGCCAAGCGTCTAGGTCGTCCTCTCATTCAGACAAACCCTTACGAGGATGTCATAGCCTGTGATGTTGTAAATCCTGACCACATTGATGTGGAGTTTGACTCTATTGGGGGACTGCGATCAATCAAGCAATCTTTGTTTGAACTTGTTATACTGCCTCTAAAAAGACCTGAACTGTTTTCTCATGGCAAGCTTCTTGGCCCACAAAAGGGGGTCCTGTTGTATGGACCACCTGGTACTGGGAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCTGGATCAGTTTTCATTAATGTAAGGATATCAAACCTCATGAGCAAGTGGTTTGGTGATGCTCAGAAACTTGTGACAGCTATATTTAGCCTGGCTTATAAGCTCCAGCCTGCCATTATATTTATTGATGAAGTTGACAGTTTTTTGGGTCAGCGTCGTACAACAGATCATGAGGCAATGTTAAACATGAAAACAGAGTTTATGGCTTTATGGGATGGATTTACCACTGATCCAAATGCTCGGGTTATGGTCCTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTAGGCGTCTTCCTCAGGCCTTTGAAATTGGAAGTCCAGACCAAAGGGAGAGGGCTGAGATATTAAATGTTATCTTAAAGGGTGAGAGGTGCGAAGACAACATCAACTTTAATCATATAGCTGGGTTGTGTGAGGGATATACTGGTTCAGATCTGTTTGAGCTCTGCAAGAAGGCTGCCTATTTTCCTGTTAGGGAACTACTGTTACAAGAGAAGCAAGGAAAACGTTCTCCTGCACCGAGGCCTCTGATGGAGTCAGATTTGGAGGAGGCCCTAGCCACTTCACAGAAAACTAATGTTGCTGCAGGTGTATACAGTGGATTAAACCTACAGTCACCAAGATGGACAGGGCAGTCAGGTGATTATCAGTTTCAAGCTGCAATCAACGAACTCTCTAAGCTTGTGGTTTCTCAAATTATTAACCTTCAATCATATACCCAGGATCCTTAA 1170 0.4419 MAGSSQTKSLQDLLLYAASAALSCLVLFVGLRQLDPNREASKRALEHKKEIAKRLGRPLIQTNPYEDVIACDVVNPDHIDVEFDSIGGLRSIKQSLFELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRISNLMSKWFGDAQKLVTAIFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEAMLNMKTEFMALWDGFTTDPNARVMVLAATNRPSELDEAILRRLPQAFEIGSPDQRERAEILNVILKGERCEDNINFNHIAGLCEGYTGSDLFELCKKAAYFPVRELLLQEKQGKRSPAPRPLMESDLEEALATSQKTNVAAGVYSGLNLQSPRWTGQSGDYQFQAAINELSKLVVSQIINLQSYTQDP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0886 389 Gene3D - 80 337 IPR027417 -
Bisa09g0886 389 Gene3D - 253 333 - -
Bisa09g0886 389 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Bisa09g0886 389 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Bisa09g0886 389 CDD RecA-like_ATAD1 85 250 - -
Bisa09g0886 389 SMART AAA_5 118 254 IPR003593 GO:0016887
Bisa09g0886 389 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 51 346 - -
Bisa09g0886 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 306 IPR027417 -
Bisa09g0886 389 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Bisa09g0886 389 Pfam AAA+ lid domain 274 308 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0886 Bisa-ChrBisa09 12810670 12813869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0886 39 318 Calmodulin-binding Proteins AT3G56690 32.632 3.27e-36 138