Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0872 ATGGGCCATTGCTGCAGCAAAAACCTTTCTGCAGTCGACAATGAAACCACCGCCGCCGATCTCCGCCGGAAACGTCCTCATTCGGCGGCATCGCCACCGCCTTCTGGCGATTCAGTCTCTGTAGCCAGCGATGCAACCCCTGGCCGGAATACTCCCGCCAACTCCTCCTCCAACAGCCCCTTTACCAGCCCACTCCCCCCGGGAGTGGCGCCGTCGCCAGCTAGGACTCCAGGTCGGAAATTTCGATGGCCTCTACCGCCTCCGTCGCCGGCGAAGCCGATCATGGCGGCAATTCTGAGACGGCAGGTGAAGGGTCAGCCGAAGGAGGGGCCAATACCAGAGGAGAAAGGCGAAGTAAGAGAGGGTGAGAGGCCACTGGATAAGAGTTTTGGATATGCCAAGAATATTGGAGCCAAGTACGAGCTGGGGAAAGAAGTAGGTCGAGGACATTTTGGTCATACTTGCTGGGCTAAAGCAAAGAAGGGAGAGCTTAAGGGGCAGTCAGTAGCAGTGAAAATCATATCGAAAGCTAAGATGACAACAGCTATAGCAATTGAAGATGTACGGAGGGAGGTGATGATTTTGAAAGCCTTATCTGGACATAAGAATTTGGTCAAGATTCACGATGCATTTGAGGATGCCAATAATGTCTACATAGTGATGGAATTGTGTGAGGGTGGAGAACTACTCGACAGAATTCTCTCAAGAGGTGGAAGATACAGAGAAGAAGATGCTAAAGCAATAGTTGTACAAATTCTAAGTGTAGTTGCCTTTTGTCATCTTCAAGGAGTTGTTCATCGAGATCTAAAACCGGAGAATTTTCTTTTTGTCTCAAAAGAGGATGATGCTCCGATGAAGGTTATTGATTTTGGTCTATCTGAATTTGTTAGGCCAGATAAACGCCTGAATGATACTGTTGGCAGTGCCTACTACATTGCACCTGAAGTGCTCCACAGATCTTACAGCGTTGAAGCAGATTTATGGAGCATTGGGGTTATAGCATACATACTGTTATGTGGAAGCAGACCATTCTGGGCACGCACTGAATCAGGAATCTTCCGGTCTGTGCTTAGAGCTAGTCCTAACTTTGATGATTCACCTTGGCCGTCAGTATCACCAGAAGCTAAAGACTTTGTAAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGACTGCTGCCCAAGCACTAAATCACCCCTGGTTGAGAAATGAAATGCAAGATATTCCTTTAGACATTTTAATCTATAAGTTAGTCCAGTCATATGTGCGTGCAACACCTTTAAAACGGGCAGCACTGAAGGCTCTCTCAAAAGCATTGACAGAGGAGGAGCTCATCTACGTTAGAGCACAGTTTGGCCTCTTGGAACCAAAAGATGGTTGTGTTTCCCTGGACAATTTTAGAGCGGCTCTCATGAAAAATGCAACTGATGCTATGAAGGAATCAAGAGTCCCTGACATTTTAAATTTGATGGATTCGCTTGCCTACCAAAAAATGGACTTTGAAGAGTTCTGCGCTGCCGCAATCAGTGTATACCAGCTCGAGGTTCGTGAAGAGTGGGACGAAATTGCAAAAACAGCGTTTGAGTACTTTGAACAAGCAGGAAACCGAGTCATTTCAGTTGAGGAGTTGGCACAGGAAATGAATCTGGGTGCTTCATCCTACTCTTTACTGGGCAATTGGATACGACAATCCGACAGAAAGCTCAGCTTTGTCGGATATAAGAAGTTTTTGCATGGTGTCACGATTCGAAATTCAAATACAAGACAGCGACGACGGAAGCAGAACGCATGA 1794 0.4666 MGHCCSKNLSAVDNETTAADLRRKRPHSAASPPPSGDSVSVASDATPGRNTPANSSSNSPFTSPLPPGVAPSPARTPGRKFRWPLPPPSPAKPIMAAILRRQVKGQPKEGPIPEEKGEVREGERPLDKSFGYAKNIGAKYELGKEVGRGHFGHTCWAKAKKGELKGQSVAVKIISKAKMTTAIAIEDVRREVMILKALSGHKNLVKIHDAFEDANNVYIVMELCEGGELLDRILSRGGRYREEDAKAIVVQILSVVAFCHLQGVVHRDLKPENFLFVSKEDDAPMKVIDFGLSEFVRPDKRLNDTVGSAYYIAPEVLHRSYSVEADLWSIGVIAYILLCGSRPFWARTESGIFRSVLRASPNFDDSPWPSVSPEAKDFVKRLLNKDHRKRMTAAQALNHPWLRNEMQDIPLDILIYKLVQSYVRATPLKRAALKALSKALTEEELIYVRAQFGLLEPKDGCVSLDNFRAALMKNATDAMKESRVPDILNLMDSLAYQKMDFEEFCAAAISVYQLEVREEWDEIAKTAFEYFEQAGNRVISVEELAQEMNLGASSYSLLGNWIRQSDRKLSFVGYKKFLHGVTIRNSNTRQRRRKQNA 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0872 597 SUPERFAMILY EF-hand 426 580 IPR011992 -
Bisa09g0872 597 FunFam CDPK-related kinase 1 133 228 - -
Bisa09g0872 597 FunFam CDPK-related kinase 1 438 509 - -
Bisa09g0872 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Bisa09g0872 597 Gene3D - 425 581 - -
Bisa09g0872 597 Gene3D Transferase(Phosphotransferase) domain 1 230 424 - -
Bisa09g0872 597 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Bisa09g0872 597 MobiDBLite consensus disorder prediction 104 123 - -
Bisa09g0872 597 MobiDBLite consensus disorder prediction 33 63 - -
Bisa09g0872 597 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0872 597 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 562 - -
Bisa09g0872 597 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0872 597 MobiDBLite consensus disorder prediction 1 92 - -
Bisa09g0872 597 Gene3D Phosphorylase Kinase; domain 1 133 229 - -
Bisa09g0872 597 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Bisa09g0872 597 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0872 597 FunFam CDPK-related kinase 3 132 304 - -
Bisa09g0872 597 SUPERFAMILY Protein kinase-like (PK-like) 139 423 IPR011009 -
Bisa09g0872 597 CDD STKc_CAMK 139 401 - -
Bisa09g0872 597 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0872 Bisa-ChrBisa09 12597881 12602850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0872 1 585 EF-hand Containing Proteins AT3G50530 56.025 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa09g0872 Pkinase 6.7e-70 CL0016