Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0868 ATGGGTGAATTTGGCGTTTCGGACAAGGAGGATAAGAAAAATGGTAGCACTGGTGTTTATGGGTTGGGTTCGAAGGTGCAGAACGTTGAAGCAGTCCCCAGTAAGACCATGATGATGATGGTTCCTTCTCCTCATAATCATCATATTCCTCAACTAGCTCCCTTTGTTAATGATCCCTTCTCTGCTGCTGCTGATGCTGATGGTCCCATCTCTATGACTTATTATATCAACCATTTTGTTAATGGCGCTTCTGCCTCTGCTTCGGGTGCTGCACCTTTAAGACCCTTGCAGCCTTTTCACATTCCATCCTCCTCTTCTGGAGCCACCACTTACACCGCCTTCAAATCCTCTGGGGGAAGTATGGCAGCTCCATTGGGGTTTCCTTTCACAAATGCACAATGGAAGGAGCTTGAAAGACAAGCCATGATATACAAATATCTGATGGCTTCAGTTCCTGTTCCTCCCCATCTCCTTATCCCCACTGCTGCTTCTCTCTCTTACTTGGATAGTGGTTTCAACCTGAGGTTTCCAAGCGGTAGTGATGCAGAGCCAGGGAGGTGCAGGAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCGCCTAACCACAAGTATTGTGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCAACCGAAAACCGACAACGATAATCAGTTAATCAAGAGGATTCGCCATGATTATCTTTGTTTCCCTGCTCCTGCTGTTACTATGGCTGCTTCCAACCCCATAATCAGCAATGAGGGGTCTTCATCTCAGTTTCTTGAGTCTTCTACTACTACTACCAGTCAGCGATACTTTGAATCTTCCCTTTCTCTTGATAATAAGTTTGGCGTCAAAGCTGCACAATTTGACTCCTTTGCTTCCGTCTCATCAAATAAGGAACCCAGAGGCTTGGAGTGGACGCTTAAGGGAGACACTATTTGCATGGCTGCTTCTGATCCAGAATGGCAGCCTCTGATACAAAGCAAACTTGGATTGAATACCGGAATTACATGCAACAACAATGCTTCAGTTTCAACCTCCTACTACAAAGACCCTCTGCAACATATGAATTCATATGAAGTTTTCAGTTGTGGACTAGAACACCACAACAATCGCTCTCCTCTGTGCCCCAATCCTCAGTCCGTAAAACCAAGGGGTTTCATTGATGCTTGGTCTAATGCAGAAACAGAGGAAAACAGTAGCATCAAGAAGAACTCTGCTGCATCAAATCCAAAGCTGTCACTTTCTTCTCTTGATTTGTCAATGGGTGGCGATTTGGATGAGGACACGGGTTCTATCCATATGGGTTTGGGCCTAATGGAGCCCCCTGCACCTTGGGCTGCTTCTTCAACACCTGGGGGCCCACTAGCTGAAGTCCTGAGGCCCACCACCACCTCCAACAACGAGACAGCCTCGGCCTCCCATCCATCCTCTCCATCAGGGGTATTGCAGAGAACGCTTGCTTCGCTGTCAGATAGCAGTAGCAGTAGCAGCCCAAGGGTTTCATCTTCCAGGGCCAATTCTGAAATGGCCTTCCTCTTCTTTAACCACACCTAG 1587 0.472 MGEFGVSDKEDKKNGSTGVYGLGSKVQNVEAVPSKTMMMMVPSPHNHHIPQLAPFVNDPFSAAADADGPISMTYYINHFVNGASASASGAAPLRPLQPFHIPSSSSGATTYTAFKSSGGSMAAPLGFPFTNAQWKELERQAMIYKYLMASVPVPPHLLIPTAASLSYLDSGFNLRFPSGSDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVELQPKTDNDNQLIKRIRHDYLCFPAPAVTMAASNPIISNEGSSSQFLESSTTTTSQRYFESSLSLDNKFGVKAAQFDSFASVSSNKEPRGLEWTLKGDTICMAASDPEWQPLIQSKLGLNTGITCNNNASVSTSYYKDPLQHMNSYEVFSCGLEHHNNRSPLCPNPQSVKPRGFIDAWSNAETEENSSIKKNSAASNPKLSLSSLDLSMGGDLDEDTGSIHMGLGLMEPPAPWAASSTPGGPLAEVLRPTTTSNNETASASHPSSPSGVLQRTLASLSDSSSSSSPRVSSSRANSEMAFLFFNHT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0868 528 ProSiteProfiles WRC domain profile. 181 225 IPR014977 -
Bisa09g0868 528 PANTHER GROWTH-REGULATING FACTOR 5 113 416 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa09g0868 528 Pfam WRC 182 224 IPR014977 -
Bisa09g0868 528 SMART QLQ_2 127 163 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa09g0868 528 MobiDBLite consensus disorder prediction 470 516 - -
Bisa09g0868 528 Pfam QLQ 128 160 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa09g0868 528 ProSiteProfiles QLQ domain profile. 128 163 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa09g0868 528 MobiDBLite consensus disorder prediction 454 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0868 Bisa-ChrBisa09 12540771 12543079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0868 385 505 GRF Transcription Factor Family AT5G53660 37.580 1.66e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa09g0868 WRC 8.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0868 09 12540771 12543079 Bisa09g0868 09 12540771 12543079 ECH