Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0853 ATGGAGGATGGGGTGGTGGTGATGAGTGGAGAGAAAGTGGTGGAACCGAAGGAGAAGGAGAAGACAGAGGAGGAAGAGAGTGGAACGGAGAGCAAAGGAGGAGAATTGAATGGGTTGATGAGGTGGGAGAAATTCTTGCCCAGGATGATATTGAGGGTGCTCTTGGTTGAAGCTGATGATTCCACCCGCCAGATTATTGCTGCTCTTCTCAGAAAATGCAGCTACAGAGTGGCTGCTGTTCCTGATGGCTTGAAAGCATGGGAAATACTGAAGGGAAGACCGCACAATATCGATCTAATACTGACAGAAGTGGATTTGCCTTCCATATCTGGCTATCCACTTCTCACATTAATTATGGAGCATGAGATTTGCAAGAACATTCCTGTTATAATGATGTCCTCACAAGATTCAATTAGCACAGTTTACAAGTGTATGTTGAAAGGTGCTGCTGACTATCTCGTTAAGCCCCTTAGGAAGAATGAGCTAAGGAATTTGTGGCAGCATGTGTGGAGAAGACAATCATCAACAACTGGCATAAATGGTCCGGTAGATGAGAGTGTCGCACAACAGAAGGTTGAAGCCACTGCTGAAAACAATGCTACTAGTCGCTCGAGTGGAGATGCTGCATGCATTCAAAAGAATAAGGAATTAATTGAGAAAGGAAGTGATGCGCAGAGCTCTTGTACAAAGCCTGACTTGGAAGATGAAAGTGCTTCCGTGGAAAATGTGCAGGAATGTGCTCATCTAAGATGTAGCTACTCTTATCCAAGCGAAGAAAAGGTGCGGGAGGCTGAAACGTGCATTCATTTGGGCCAGATATCGATCTGGCATGATAATCATGATGGAGGGTTAACCATGGGTATATGCAAAAATGGTGAGATAAGCACAACTGATGGCAAGGATGGTTGTCCAGACCATCATAGGAGTGCTAGTATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAGCTCTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTCGCACTCATCCAAAGTGCAGTCTCAAAAGTTCCACGGTTAATTGCACAGGCACGTTTGACGTCTCTCCTCAATTAGATCTTTCCTTGAGAAGATATCATTCTGGCTACTTTGAGAAGGAAGGAACCGAAGAAAGGCATACCCTCATGCATTCTAATGCCTCAGCGTTCAAACGGTACACAAACAGACAATTGCATGCACCGCCTGCAGCTTTAATTAACTTTGGTGATCTACAAAGAGAACAGGGAGCAAATTGTGAGAAAAATATGTCCAATGTTGTTACTGGCCATAACTCAGATGGTTCAACACCTAGTATGCAGAGAAGTATCGTGTCACCCACTACACCTCAATCAAAAGAATCTCAACACTCAACTTCTCAATCCCAGCAGGGGCATTCTCTCCCAATTCAAGTAAAAGGCATAAGGTTCAATGATCTATGCAAAGCATATGGTTCTGTAGTTCCTCCTATGTTTTGTACACAGTCAAGTCCACCATCAATGCCAAGTCCAAGCTCTATTGTGCACCTTGAACCATCTTTTCAAGCCAATGCATATTATCAGTCCAATATCAAGGAAAATAGTTCGGAGCAGCTTTGTGAACCTCGTGGTCAGAATGGAAATAACCTCGCAAACCACGTTGTGTACGTGCAGGATCACAAAGTGGAACGTGCAGAAGATCGAGGACATATATCTCCTGCAACTGATCGAAGTGGAAGTAGTAGTTTCTGTAATGGACAACTGATCCGCATGAACAGCATTGGGTATGGAAGCAACTGTGGAAGTAACAGCAATGTTGATCAGGCTGTCATTGTCAGGACAGCTTCAGAGGCCAAGAATGAAGACCTAACATACAATGCAAGTTGTCATCGATCTATCCAAAGAGAAGCAGCTCTAAACAAGTTCCGCTTAAAAAGGAAAGAGAGATGCTATGAGAAAAAGGTTCGGTATGAGAGCAGGAAGAAACTTGCAGAGCAACGACCTAGAGTGAAAGGACAATTTGTTCGTCAAGCGCATCCTGATCCCCAGGCTGTAGAAAAAGATGGCAGAGAATATGATCATTAG 2070 0.4382 MEDGVVVMSGEKVVEPKEKEKTEEEESGTESKGGELNGLMRWEKFLPRMILRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEILKGRPHNIDLILTEVDLPSISGYPLLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLKGAADYLVKPLRKNELRNLWQHVWRRQSSTTGINGPVDESVAQQKVEATAENNATSRSSGDAACIQKNKELIEKGSDAQSSCTKPDLEDESASVENVQECAHLRCSYSYPSEEKVREAETCIHLGQISIWHDNHDGGLTMGICKNGEISTTDGKDGCPDHHRSASISGEAHDNHYVQISSSKEAIDLIGAFRTHPKCSLKSSTVNCTGTFDVSPQLDLSLRRYHSGYFEKEGTEERHTLMHSNASAFKRYTNRQLHAPPAALINFGDLQREQGANCEKNMSNVVTGHNSDGSTPSMQRSIVSPTTPQSKESQHSTSQSQQGHSLPIQVKGIRFNDLCKAYGSVVPPMFCTQSSPPSMPSPSSIVHLEPSFQANAYYQSNIKENSSEQLCEPRGQNGNNLANHVVYVQDHKVERAEDRGHISPATDRSGSSSFCNGQLIRMNSIGYGSNCGSNSNVDQAVIVRTASEAKNEDLTYNASCHRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQAHPDPQAVEKDGREYDH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0853 689 CDD psREC_PRR 53 156 - -
Bisa09g0853 689 Pfam CCT motif 630 672 IPR010402 GO:0005515
Bisa09g0853 689 MobiDBLite consensus disorder prediction 426 469 - -
Bisa09g0853 689 Pfam Response regulator receiver domain 53 164 IPR001789 GO:0000160
Bisa09g0853 689 SUPERFAMILY CheY-like 51 177 IPR011006 -
Bisa09g0853 689 ProSiteProfiles CCT domain profile. 630 672 IPR010402 GO:0005515
Bisa09g0853 689 Gene3D - 49 270 - -
Bisa09g0853 689 PANTHER TWO-COMPONENT RESPONSE REGULATOR 52 227 IPR045279 GO:0009736
Bisa09g0853 689 ProSiteProfiles Response regulatory domain profile. 52 170 IPR001789 GO:0000160
Bisa09g0853 689 MobiDBLite consensus disorder prediction 653 669 - -
Bisa09g0853 689 SMART REC_2 51 166 IPR001789 GO:0000160
Bisa09g0853 689 MobiDBLite consensus disorder prediction 12 31 - -
Bisa09g0853 689 MobiDBLite consensus disorder prediction 653 689 - -
Bisa09g0853 689 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0853 Bisa-ChrBisa09 12342077 12346185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0853 325 674 Response Regulator Gene Family AT5G24470 31.593 3.05e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bisa09g0853 Response_reg 1.5e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0853 09 12342077 12346185 Bisa09g0853 09 12342077 12346185 ECH