Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0850 ATGGATAATTCCACCCAAGAATCCCACCTCAGATCCGAAAACACTGTAACCTATGACTCCCCCTACCCTCTCTACGCCATGGCCTTCTCTTCCACCTCCTCCCTTGTCTCTCCCCACCAACGTATCGCAGTTGGTAGTTTCATTGAGGACTATACCAACCGCGTTGATATACTCTCCTTCAACCCTGACTCTCTCTCCATTAGATCCCACCCTTCTCTCTCATTTGATCACCCATACCCACCCACCAAGCTTATGTTCCACCCAAACGCTCACTCTTCTCTCCGAAAGTCTTCCTCCGACCTTCTCGCAACGTCCGGCGACTACCTCCGCCTCTGGGAGGTTCGGGAAAATTCCGTTGACGCAATTTCACTTCTCAACAACAGCAAGACCAGCGAGTTCTGTGCTCCATTGACCTCCTTCGATTGGAACGACATCGAACCCAAAAGAATTGGGACTTCCAGCATCGACACTACTTGTACGATTTGGGATATCGAAAAGGGGGTTGTTGAAACGCAGCTAATTGCGCACGATAAGGAGGTCTACGATATTGCTTGGGGGGAGGCTAGAGTGTTCTCGTCTGTTTCAGCGGATGGCTCTGTTAGAATCTTCGATCTGAGGGACAAGGAGCACTCCACTATCATTTACGAGAGTCCGCAGCCAGATACGCCTTTGCTTCGATTGGCTTGGAATAAGCAGGATTTGAGGTACATGGCCACTATTTTGATGGATAGCAATAAGATTGTGATTTTGGACATTAGGTCACCGACCATGCCGGTGGCGGAGTTGGAGAGGCATCGTGCTAGCGTGAATGCCATTGCTTGGGCTCCTCAGAGTGCTAGGCATATTTGTTCTGCGGGGGATGATTCGCAGGCGCTTATTTGGGAACTGCCCACTGTGGCTGGACCTAATGGAATTGATCCCATGTCTATGTATTCTGCTGGTTCTGAAGTTAATCAACTGCAGTGGTCTGTTGCTCAGCCGGACTGGATTGCTATTGCTTTTGCAAATAAGATGCAGCTTTTGAAGAGGTGGGATGTCTCTGAGCTTGATTACTTTTTCCATTTGCATTTTCTGTTTCTGTTGGGAGACCAAAGGTGTTGTTGCCTTACTAAAAGCCTCTATAAGATTCTGCTTTATTTACTTGAGTTTATTATTGTTTTCTTTTCTGCAGATATCCTCACGATGGCTAGGAAGATACTAACTGATTTGCTTGACACAGTGCTTCCTGTTGTTTGA 1236 0.4749 MDNSTQESHLRSENTVTYDSPYPLYAMAFSSTSSLVSPHQRIAVGSFIEDYTNRVDILSFNPDSLSIRSHPSLSFDHPYPPTKLMFHPNAHSSLRKSSSDLLATSGDYLRLWEVRENSVDAISLLNNSKTSEFCAPLTSFDWNDIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFSSVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPTMPVAELERHRASVNAIAWAPQSARHICSAGDDSQALIWELPTVAGPNGIDPMSMYSAGSEVNQLQWSVAQPDWIAIAFANKMQLLKRWDVSELDYFFHLHFLFLLGDQRCCCLTKSLYKILLYLLEFIIVFFSADILTMARKILTDLLDTVLPVV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0850 411 Gene3D - 129 350 IPR015943 GO:0005515
Bisa09g0850 411 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 213 IPR001680 GO:0005515
Bisa09g0850 411 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Bisa09g0850 411 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 296 - -
Bisa09g0850 411 SUPERFAMILY WD40 repeat-like 24 354 IPR036322 GO:0005515
Bisa09g0850 411 PANTHER WD REPEAT CONTAINING PROTEIN 5 342 IPR045159 -
Bisa09g0850 411 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 296 IPR001680 GO:0005515
Bisa09g0850 411 FunFam WD repeat-containing protein LWD1 11 342 - -
Bisa09g0850 411 Pfam WD domain, G-beta repeat 259 294 IPR001680 GO:0005515
Bisa09g0850 411 Pfam WD domain, G-beta repeat 173 204 IPR001680 GO:0005515
Bisa09g0850 411 SMART WD40_4 68 113 IPR001680 GO:0005515
Bisa09g0850 411 SMART WD40_4 126 163 IPR001680 GO:0005515
Bisa09g0850 411 SMART WD40_4 255 295 IPR001680 GO:0005515
Bisa09g0850 411 SMART WD40_4 166 204 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0850 Bisa-ChrBisa09 12322038 12324475 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1111 05 19103345 19104598 Bisa09g0850 09 12322038 12324475 CCT
Bisa09g0850 09 12322038 12324475 Bisa09g0850 09 12322038 12324475 ECH