Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0838 ATGCCTATTCTAACATTTGGTTATTTTAAGTCGAGCCCTTCATTAACTCTTCAGTTACCTTGTAACTGTGTGAGAAGAATGGGTTTGATTACCAAACTTAATTATTCTGTAGCTGACAGAACATTGACTACTCGTTCTGTGGGTTCACCCACATCCAAACCTGACACTTCTCGCTTAAATAGGAAACAAAGAGGTTCATCTTCATTATATATTCGTCCTAGTTTATCAGATATGAAGAAAGAGAAAATTTCAAATCGTGAGAAGGTTTATGAATTTTTGCGGGGGATTGGTATTGTTCCTGATGAGCTTGATGGTCTGGAACTTCCAGTATCAGCTGAAGTTATGAGAGAGCGAGTAGATTTTCTGCACAATTTAGGGCTTACAATTGAAGACATTAACAATTATCCCCTAGTTCTTGGCTGCAGTGTCAAAAAGAATATGATTCCCGTGCTTGATTACCTTGGTATATTGGGAGTCAGGAAATCCACATTCACACAATTCTTGCGGAGATACCCACAAGTCCTTCATGCTAGTGTTGTTGTTGACCTTGAGCCTGTGGTCAAGTATCTCCAAGGGATGGATATCAAGCCCAATGACATTCCTCGAGTTCTTGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCGGTTGCTTATTTGGTCGGCATTGGTGTAGGAAGAAGAGAAATTGGAGGGGTTTTAACTAGATTCCCTGAGATTTTGGGTATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAAACTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGATAGAGAAACGACCTTATATACTTGGCTTTGGATTGGATGAGAAGGTGAGGCCAAATGTTGAATCCCTTGAAGAGTTTAATGTTAGAAAAGCATCACTACCCTCTGTAATAGCTCAATATCCTGATATCATTGGAATGGACTTAAAGCCAAAGCTTGATAATCAAATGAATGTACTTAAATCTTTACTTGATATGGATCCTGCAGATTTTGGCAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAAAGCACCTATGTTGAAGCATGTTAATTTTCTTAAGGAATGTGGGTTTTCCTTGCAACAAATGAGGAAGATGGTTGTTGGATGCCCTCAACTTCTTGCTTTAAACGTTGACATTATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGAGAGGCCTTTGGAAGACTTGGTTGCTTTTCCAGCCTTTTTTACATATGGACTGGAGTCCACTGTAAAACCTAGGCATAAGATGGTTGCCAAGAAGGGATTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGAGAAGTTCCAGCAAAGAATGGACTATGACACTATTGACATGGACGAAATGGAAATGGAACCGTCATTCAACATGAATTCACTGATGGAACCGAGGAGTGATGAGTCAGCTTCCGAATATGAAGACAGTGATGACGGAGAAGACTAG 1512 0.4021 MPILTFGYFKSSPSLTLQLPCNCVRRMGLITKLNYSVADRTLTTRSVGSPTSKPDTSRLNRKQRGSSSLYIRPSLSDMKKEKISNREKVYEFLRGIGIVPDELDGLELPVSAEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGILGVRKSTFTQFLRRYPQVLHASVVVDLEPVVKYLQGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGGVLTRFPEILGMRVGRVIKPFVEYLENLGIPRLAIARLIEKRPYILGFGLDEKVRPNVESLEEFNVRKASLPSVIAQYPDIIGMDLKPKLDNQMNVLKSLLDMDPADFGRVVEKMPQVISLSKAPMLKHVNFLKECGFSLQQMRKMVVGCPQLLALNVDIMKLSFDYFQKEMERPLEDLVAFPAFFTYGLESTVKPRHKMVAKKGLKCSLAWMLNCSDEKFQQRMDYDTIDMDEMEMEPSFNMNSLMEPRSDESASEYEDSDDGED 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0838 503 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 MobiDBLite consensus disorder prediction 477 503 - -
Bisa09g0838 503 MobiDBLite consensus disorder prediction 45 66 - -
Bisa09g0838 503 Gene3D Transcription termination factor 3, mitochondrial 132 255 IPR038538 -
Bisa09g0838 503 Gene3D Transcription termination factor 3, mitochondrial 256 466 IPR038538 -
Bisa09g0838 503 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Bisa09g0838 503 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 PANTHER CGI-12 PROTEIN-RELATED 157 370 IPR003690 GO:0003690|GO:0006355
Bisa09g0838 503 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0838 Bisa-ChrBisa09 12123984 12125495 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa09g0838 mTERF 1.5e-108 No_clan