Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0836 ATGAAGACTATTCTCTCCTCCGAAACGATGGACATCCCCGATGGGGTGAACATCAAGGTGCGCGCCAAGATCATCGAGGTGGAGGGACCTCGCGGCAAGCTTGTCCGTGATTTCAAACATTTGAACCTCGATTTCCAGCTCATCACTGACGAGAATGGCCAGAAGAAGCTCAAGGTCGAAGCCTGGTTTGGTTCTCGCAAGACCTCTGCGGCCATTCGCACTGCTCTCAGCCATGTGGAGAATCTCATTACCGGCGTCACCAAGGGTTACCGCTACAAGATGCGGTTTGTCTATGCTCACTTTCCAATTAACGCAAGTATTACCAACAACAACAGGTCCATTGAGATCCGAAACTTCTTGGGAGAGAAGAAGGTGAGGAAGGTAGACATGCTTGAAGGTGTTTCAATTCTACGATCTGAAAAAGTTAAGGATGAATTGATATTGGATGGCAATGATATTGAGCTGGTTTCTCGGTCTTGCGCCCTCATCAATCAGAAATGCCATGTCAAAAATAAAGATATCCGGAAGTTCCTTGATGGTATCTACGTTAGCGAGAAGGGGGCAATACTTGAAGAATAG 579 0.4698 MKTILSSETMDIPDGVNIKVRAKIIEVEGPRGKLVRDFKHLNLDFQLITDENGQKKLKVEAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNNNRSIEIRNFLGEKKVRKVDMLEGVSILRSEKVKDELILDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGAILEE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0836 192 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 190 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 Gene3D - 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 Pfam Ribosomal protein L6 12 89 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 Pfam Ribosomal protein L6 101 180 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 ProSitePatterns Ribosomal protein L6 signature 2. 165 186 IPR002359 GO:0003735|GO:0005840|GO:0006412
Bisa09g0836 192 FunFam 60S ribosomal protein L9 1 89 - -
Bisa09g0836 192 Gene3D - 90 192 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 PIRSF RPL6p_RPL6a_RPL9e_RPL9o 1 189 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 SUPERFAMILY Ribosomal protein L6 1 89 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa09g0836 192 FunFam 60S ribosomal protein L9 90 192 - -
Bisa09g0836 192 SUPERFAMILY Ribosomal protein L6 90 186 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0836 Bisa-ChrBisa09 12090703 12092361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0836 1 192 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 83.420 1.08e-119 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0836 09 12090703 12092361 Bisa09g0836 09 12090703 12092361 ECH