Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0818 ATGGAGCAGATGCACGAACAAGAACATCACCGATGGGTAGCAATGGAGGAAGAAGTGGAAGAAGCTGCTTTGCAAGGAAGGCAATCCCGAAAGCAACTTCAGGACAACGTTACTTCGAGTGTGACAGTATCGTCTTCTTCTTCATGGTTTACTACTAGCAATGGATATGGCGATGGTACTAGTGGTGTTGCCTCAGTGAATTCTTACCTAGATTATGGACCTATTGTTCAGAAAGACGAAGAAGTTGCAGAAACGGGCAATGTTAGCGAAAGTGGTGTTACTTATTATAATGGCGATAAAGTGGATAAAGCAGCAGCTGGGCTTGGGCTTGCAGCAGAATTTGTAGGAGCAGAGACTAATGGTAATGGGGAGGCTATAAGTAGCGTTTACTTTGACAAGCAAGAAGTCTACTTGTTTGGATATTTGAAACTAGCTTGTCTCAAGATGCCTGTTCAGGATCTTAAGCAAAACTCTGACTTGCTGATGCCTATCAAAACTATGATTCAACATGGATCATGTTTTATTTGTGAATCTAAAGGCAGTGATTCCAACAGTGGACCTTCTGAAGTTCAAAATGGTGATGGTGCTAGGTCGGTTCTTCTGACAAATAATGGAATAGGAGATTTTAATATGCAAGTACAAAATCCAGTTATTCAGAAGAGTCTAAGCAATGAAGTCAACAATCAATATATGAAAACCGTGAAGGACAAAGGCCCTTTGAGTTCTGAATTATTATCACCTATGAATGATTCATATGAAATAAAAGCTGCTAATTTTAAGCATTTTGACGATGAAACTAGTACAAAAGCAATAAAAGACATTGATCAACAACCGGGGGATCTTGATGTTGAGGAACTATTGGCGAAACAAGAGACGCACGATTTGTTCTGTCCTAATTGCAATTCTTGCATCACTAAAAGGGTTATCCTCAGGAAAAGGAAAAGGAGCATTCGTAATATGGACACCACAGATGGCTCTGATCTGGTTGATTGTTCAGCAACTAAGGCTCTCCGAGGTGATCATGCAAATTTAACTTCTAATGCTGGTAGTTTAGAGCAGCAGCCATCAGCTGATGATAGTCCTGTACAAGAACAAGAAGCATTTAGATGCTTAGAATGCTTCAGCATATTTATTCCTAGAGGAAATGGTTTCATTAAGTTCTGGAATTTTGGTGGTTTTCGTGAGCATGGAGCTTCACAAATAGCTTCAACTATACCTGCATCCAATATACAAAATCCATCAAATATAACTGTCTCCAATGTGGAAAATTCTTCAAATGTAACTCTGTCAAATTTGCAAAATCCCTCAAATATTCCAACTTCTAACGAAAGCTGGTTCTTCTTTCTATTTTCTTCTAAGGGGCAAACAGTAGGTGAGCAAGGTAAAGCTTCCCCAAAACATTCTAAAACTGGTCCTGCTGAACAGAGTCACTCATCATCAATCGCTTCAAATGTGTTTACCTCCCCTGATAATGGTCATTCAGACAGCCCAGTTACTAATACAACTTTTTTTGAGAACAGAAGAACTGAGGCAGATATTAAGGCTGGGCACGGGGGACCAAATGGAAACGTGAGGTCCAATGAGGGGGAGGAAAATGATGATCTAGCAGATATAAAGAAGACAGATATTGTCGCAAATTTGCCCTCAAAGAAGTTGTCGAGTGTAGCAACTGCAAGTACCAGTGAAGAACTTGTTAATGCAGAAGAACCTGCAAAAGATGCCATTCTGAAACCTTATGAAAGGGAATCTGAATTTTGGGTTCCTTCAAATGTTGGTTCTGACATACTTGCAAAGTCACGGAAGGATGTAGACAAGACACCTGAAATTGTTCAGAACGGTTATCCCTCATTGATAATGCAAGCACAGGTACCTGCTCAATCACATAGCAGTGCAGTACTTGTAAATGACGCAACTATAAACACGCCAAGTCCTGGACTAGATGCTAGAATTTCATCAGGAAAAGACTTGAAACTAATAAACAAAGGGGAAAAGGAAATTGAAGAGGAAATAAAACCTGCAGTAGCAAGTCAAAATAAAGGGACTGATGTGATACTTATTGTTGAGGAAGAGAGAGTTCAATCCACAACATCTCAGATGGCAGATAGTGTCCATGTTAAAAGTGCTACTTTTACAGAACCAGTAACTCAAGTTTATATGAGTGAAGAAGCAAGAACTGAAATTGGTGAACCTCACGGATGGGAAATACTTAAAAGCATTGTCTATGGAGGTTTAATGGAATTAATCACAAGTCTAGGAATTGTATCATCTGCAGCTAGTTCTGGTGCTGACCCATTGAATATCATTGCATTAGGATTGGCAAATCTGATTGGTGGATTATTCATCATTGGCCATAATGTGAGCAAGCTTCATTCCATGCCACTTCTTTCACTTACACTATTTCCTTTCCATTTAAAACTCATTCCTGCCCATTTTTATTTTCAGCTTCTTGAATTGAAAAATGGTAAATCTGGAGAAGATCTGCAGCAAATGAACATGCAAGAAGATCGGTACCAAGAACTACTAGGGCGCAGAGCAAACTTTGTACTACATGCAATTGCAGCTGTTCTATCATTCCTAATATTTGGGTCTGTCCCTATCGTTATATACGGCATCTTTACCAATAAGAAGTACCAACATGAAGTTAAGCTTGCAGCAGTAGCAGCAGCTTCTCTTGTATGCATCATTCTGCTTGTTATTGGGAAGGTTTACACCCAAAGACCACCCAAATCCTATACCAAAACTGTATTTTACTATGTTACGATGGCGCTTGCGGTTTCAGGGGTGTGTTATATAGCTGGTGGCCTAGTCAAGGACCTCCTTGAGAAGTTCAGTAACTCGGAATCTGGTTTTCTTATTACCATGCCCTTCTCAGGCACAGGAACGATGGATCCAGCATGGAGAGGGAGGAGATTGGCTCTCAGGGTACATCTTGGTCTTGGATTTGGAAGACTAAGGCTCCTGCGAATATTCAATTCTTTTGCCACAACGCAGTGCCAATTGGAGATGGAGACTCTGAAAGCTGCAATTCCAGAAAGCCTGAAGCGAATGATTAGAGAGAGCACTACCGATGATCTTCCCGTCACATGTTCTTCTCTTCATCACTTCTTTCTTCATTTCGAGCCCTTTCACCGAATAGTGAGTGACTTGGCAGACCCAAAAAATGCTCTCTGTGGTAAGACTGAAGCCGCTGCTTTGGAATCCAAGCAGCTTGGCAACCAAGGCTTCTCGAAAGGAGATTATATGAATGCTTTGAATTGCTATACTCAGGCATTGCGTGTGGCTCCTTTGGAAGCTTGTGTCTTGGGGAATAATCTGGTTACAACATTATATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAGTAGAGTGTTTGCGGGACTGCACACGAGCTCTCCAGATATGTCCAAGCTATACAAAGGCATGGTATAGGAGAGGTAAGGTGAATGCTTCATTGGGAAATTATAAAGATGCAATTAGCGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGGGTGGGAAGAAACAAATAGAAAGTGAACTAAAAATTATTTTAGACCAATGCAAGAGGACAAGTTCAGTAGTTCAGCTTCAGCATGACAAGAATAGCTTGGACACAGTAGGTGAGATGCCCGAAATAAAGCTACAGTTGGTCACCATGCCTGATAAAGGAAGGGGCATGGCTTCCTCATGTGACATTTCACCAGCTTCCTTAGTTCATCGTGAAGAACCTTATGCCATGATAATATTAAAGCAATGTCGGGAAACTCATTGCCATTACTGCTTGAATGACCTACCTGCTGATAAAGTTCCTTGTAGATCATGTTCAATTCCACTGTACTGCTCCCAACAGTGTCAGATACGGGCAGGTGGACAAATATTCAGGATTAACCCAGAAGACCATAGTATTCTTAAAAATCTACCCAGTGATCTTGGAAAGTATGTTGCAGAAATTATATTAAGAAATGATTCTGAGTATGAAAATAAGGACATTCCTGAACACAAACATGAATGTCAAGGTGTACATTGGTCTGCAGTATTACCATCTGAGATAGCTTTGGCTGGCCGTGTACTGGCGAATTTTTTGCAAAAGAGTGCATACAAAGATATTACAAACTTCGTGGAAAGGCTGGAACTTTCTCATTGTTATACACAAATTCCATCTGATAGCAAACTGGATTTACATATATATGCCATTATATTGCTGTATTGTCTGCAATACTCATGTGGTGCTGTGATTTCCATGGATGGAGTATCTATGTCACAGGTTGTCATAATTTTTTCTCAAATTAAAGTGAATTGTATGACTGTTGTTCGTATGAGATCAATAGATGCTCATGGGTTACAAGACCAATTTGGAGAATCCCGAACCAGTGCTTATTTAACAAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTACATATATGGCAGTTTGTTCAACCATTCTTGCCAGCCAAACATTCATGCGTATTTCCTTTCACGTACTCTGTGTATAAGAACAACAAAAGTTGTAGCGGCTGGGTGTCAGCTGGAATTGTCCTATGGTCCACAGGTTGGGCTGTGGGATTGTAAAGATCGCCATGCCTTTCTGAAAGATGAGTACACATTTCAATGTCAGTGTAGTGGTTGTTCAGAATTCAATCTATCTGACATCGTCCTGAATGCTTTTCACTGCATCAATCTAAATTGTTCTGGCACAGTCTTGGAGAGCAGAGTAATTGACTGGGAAAAGAAGAAAATCAGGCACTTTCCTAGTTCTGACGAAGTTGACGAGAATGATGACATTCATCAAGTTTGCCCTTGTGTATTCAAACAAAATGGTGGCTCCATTCATATTCGACCTGGATACTGTTTGAAATGTGGTTCTTACCGTGATTTTGAATCTTTACATGCTGCAATTGATAAAGCTTGGATATGCTTCAAAAGGTTGCAGGATGCGATAATATCAAAAGAAATTTCAAATACTACTATTTCAGATGCTTTGAAATCTCTTCATTTGCTAAGGTCAAATCTGCATGCATTCAACAAGCGTATTGCAGAGGCAGAGGATATCCTTGCTCAGGCCTTTTGTATAATGGGAGAATGTCGATTAGCAATTGACCACTGTAAAGCATCTATGCTGATTCTGGAAAAGCTATATGATCACGATGATATTGTCATTGCTTATGAACTTGTGAAGCTTTGTTCCATTCAAATTTCTATGGGTGATAAAACTGCTCTGGAAAGCATAAGTCGAATATATGATATTTTCTCACTTTATTATGGACTTCATGCACATTTGGTATTCCCATATCTTGAGTACCTTAAGAAAGAAACTGAGAATTTTTATAAAAATGTGAGTGCTTGCTAG 5364 0.3978 MEQMHEQEHHRWVAMEEEVEEAALQGRQSRKQLQDNVTSSVTVSSSSSWFTTSNGYGDGTSGVASVNSYLDYGPIVQKDEEVAETGNVSESGVTYYNGDKVDKAAAGLGLAAEFVGAETNGNGEAISSVYFDKQEVYLFGYLKLACLKMPVQDLKQNSDLLMPIKTMIQHGSCFICESKGSDSNSGPSEVQNGDGARSVLLTNNGIGDFNMQVQNPVIQKSLSNEVNNQYMKTVKDKGPLSSELLSPMNDSYEIKAANFKHFDDETSTKAIKDIDQQPGDLDVEELLAKQETHDLFCPNCNSCITKRVILRKRKRSIRNMDTTDGSDLVDCSATKALRGDHANLTSNAGSLEQQPSADDSPVQEQEAFRCLECFSIFIPRGNGFIKFWNFGGFREHGASQIASTIPASNIQNPSNITVSNVENSSNVTLSNLQNPSNIPTSNESWFFFLFSSKGQTVGEQGKASPKHSKTGPAEQSHSSSIASNVFTSPDNGHSDSPVTNTTFFENRRTEADIKAGHGGPNGNVRSNEGEENDDLADIKKTDIVANLPSKKLSSVATASTSEELVNAEEPAKDAILKPYERESEFWVPSNVGSDILAKSRKDVDKTPEIVQNGYPSLIMQAQVPAQSHSSAVLVNDATINTPSPGLDARISSGKDLKLINKGEKEIEEEIKPAVASQNKGTDVILIVEEERVQSTTSQMADSVHVKSATFTEPVTQVYMSEEARTEIGEPHGWEILKSIVYGGLMELITSLGIVSSAASSGADPLNIIALGLANLIGGLFIIGHNVSKLHSMPLLSLTLFPFHLKLIPAHFYFQLLELKNGKSGEDLQQMNMQEDRYQELLGRRANFVLHAIAAVLSFLIFGSVPIVIYGIFTNKKYQHEVKLAAVAAASLVCIILLVIGKVYTQRPPKSYTKTVFYYVTMALAVSGVCYIAGGLVKDLLEKFSNSESGFLITMPFSGTGTMDPAWRGRRLALRVHLGLGFGRLRLLRIFNSFATTQCQLEMETLKAAIPESLKRMIRESTTDDLPVTCSSLHHFFLHFEPFHRIVSDLADPKNALCGKTEAAALESKQLGNQGFSKGDYMNALNCYTQALRVAPLEACVLGNNLVTTLYINRATVLHKMNLLVECLRDCTRALQICPSYTKAWYRRGKVNASLGNYKDAISDLNVAKSMESSLGGKKQIESELKIILDQCKRTSSVVQLQHDKNSLDTVGEMPEIKLQLVTMPDKGRGMASSCDISPASLVHREEPYAMIILKQCRETHCHYCLNDLPADKVPCRSCSIPLYCSQQCQIRAGGQIFRINPEDHSILKNLPSDLGKYVAEIILRNDSEYENKDIPEHKHECQGVHWSAVLPSEIALAGRVLANFLQKSAYKDITNFVERLELSHCYTQIPSDSKLDLHIYAIILLYCLQYSCGAVISMDGVSMSQVVIIFSQIKVNCMTVVRMRSIDAHGLQDQFGESRTSAYLTSNVEQVRVGKAIYIYGSLFNHSCQPNIHAYFLSRTLCIRTTKVVAAGCQLELSYGPQVGLWDCKDRHAFLKDEYTFQCQCSGCSEFNLSDIVLNAFHCINLNCSGTVLESRVIDWEKKKIRHFPSSDEVDENDDIHQVCPCVFKQNGGSIHIRPGYCLKCGSYRDFESLHAAIDKAWICFKRLQDAIISKEISNTTISDALKSLHLLRSNLHAFNKRIAEAEDILAQAFCIMGECRLAIDHCKASMLILEKLYDHDDIVIAYELVKLCSIQISMGDKTALESISRIYDIFSLYYGLHAHLVFPYLEYLKKETENFYKNVSAC 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0818 1787 Pfam SET domain 1381 1520 IPR001214 GO:0005515
Bisa09g0818 1787 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1002 1780 - -
Bisa09g0818 1787 Gene3D Tetratricopeptide repeat domain 1525 1780 IPR011990 GO:0005515
Bisa09g0818 1787 SMART tpr_5 1107 1140 IPR019734 GO:0005515
Bisa09g0818 1787 SMART tpr_5 1141 1174 IPR019734 GO:0005515
Bisa09g0818 1787 SMART tpr_5 1064 1097 IPR019734 GO:0005515
Bisa09g0818 1787 SMART tpr_5 1684 1717 IPR019734 GO:0005515
Bisa09g0818 1787 ProSiteProfiles SET domain profile. 1216 1520 IPR001214 GO:0005515
Bisa09g0818 1787 SUPERFAMILY TPR-like 1065 1712 IPR011990 GO:0005515
Bisa09g0818 1787 MobiDBLite consensus disorder prediction 458 506 - -
Bisa09g0818 1787 MobiDBLite consensus disorder prediction 458 532 - -
Bisa09g0818 1787 Gene3D Tetratricopeptide repeat domain 1041 1197 IPR011990 GO:0005515
Bisa09g0818 1787 ProSiteProfiles TPR repeat profile. 1064 1097 IPR019734 GO:0005515
Bisa09g0818 1787 SUPERFAMILY SET domain 1219 1546 IPR046341 -
Bisa09g0818 1787 Gene3D SET domain 1424 1519 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0818 Bisa-ChrBisa09 11840251 11855792 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa09g0818 SET 1.8e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1804 05 33895456 33895809 Bisa09g0818 09 11840251 11855792 CCT