Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0804 ATGGGGAGGAGTAAGCATCTATCCCTCTCTTACTTTTTGAATGCTATATTTATGGTGATGGTAATAACAAATGATGTAGGGCCTGCAAGGTGTTATAGGCAAATTAAAAACAAACCATACCCCAAATCACGCTATTGCCGTGGTGTTCCTGATCCCAAGATTAGAATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAGTTTCCTTTCTGCGTCCATCTTGTTAGTTGGGAGAAGGAAAATGTTTCAAGTGAAGCGCTGGAAGCTGCTAGGATTGCTTGCAACAAGTATATGGCCAAATTTGCTGGAAAAGATGCATTCCATTTGAGAGTTAGGGTGCATCCATTCCATGTTCTTAGGATCAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTTCAGACAGGGATGAGAGGTGCATTTGGAAAGCCACAAGGAACATGTGCTAGAGTTGCAATTGGTCAGGTCCTTCTTTCTGTCCGCTGCAAGGACAGCAACAGCCCTCATGCCCAGGAAGCCCTTCGTCGTGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATTATAGTTAGCAGGAAATGGGGGTTCACCAAGTTTAACCGTACTGATTATCTGAAGTTCAGGTCAGAGAATAGGATTACTCCAGATGGTGTGAATGCAAAGCTTCTTGGATGCCATGGACCATTGGCTAATCGTCAGCCTGGAAGAGCTTTCCTGTCCAGTGCAACTGCTTAG 735 0.4408 MGRSKHLSLSYFLNAIFMVMVITNDVGPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKFRSENRITPDGVNAKLLGCHGPLANRQPGRAFLSSATA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0804 244 Pfam Ribosomal protein L16p/L10e 35 189 IPR016180 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 FunFam 60S ribosomal protein L10 25 229 - -
Bisa09g0804 244 SUPERFAMILY Ribosomal protein L16p/L10e 28 196 IPR036920 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 NCBIfam 50S ribosomal protein L16 28 197 IPR001197 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 CDD Ribosomal_L16_L10e 64 189 IPR016180 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 Gene3D Ribosomal protein L10e/L16 26 240 IPR036920 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 ProSitePatterns Ribosomal protein L10e signature. 131 152 IPR018255 GO:0003735|GO:0005840|GO:0006412
Bisa09g0804 244 PANTHER 60S RIBOSOMAL PROTEIN L10 28 236 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0804 Bisa-ChrBisa09 11627763 11630171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0804 28 243 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.500 3.77e-143 398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1787 05 33305928 33308171 Bisa09g0804 09 11627763 11630171 CCT