Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0800 ATGGTTTCCCCACAATATTCTACCTTAGAGGGGAATTGTTGCCAGAAGCCTTTCCTGAAGCAGTTGCTTCTTCCAAGTGAATCACCTGATGTTTTCCGTTCTGACTCTCTGGAGTTTGATTTTTCTGACGTGTTTGGTCCAGCTCCTGTTCCAGCCACAAAAGAACTCTGTTCTGAGAAATCTAGAAACTTTGTGGCTGCACCAAATCCAAATGAAAATATTTACAATGATCCTGCAGTCATTCACAGCCGATCCCATTCTGTTGTGGGCCCCACATCCTATATCAGTCAGTGCTTGAAGCTTACCAAGATAAATTATCTTGAAACGGAGGATGCACTAGATCTGGTGGAGGAGGTCTGTAGAGAACAACAAAAAGGATTTAAGGAAGGGAAATCTAATGAGCAACTCAATAATATCAGTTATAACTATCGAAGTGTTGGACTTGAGGATTTTGAAGTTTTGAAGGTTGTGGGGCAAGGTGCTTTTGGAAAGGTGTACCAGGTGAGGAAAAGGGGCACATCAGATATTTTTGCAATGAAGGTCATGCGCAAAGACAAGATCATGCAGAGAAATCACGCTGAATATGTGATTTCTGAAAGGGATATATTGTCAAAAGTGGATCACCCTTTCATCATGCGGCTTAGATACTCATTCCAAACCAAATATAGGTTATACCTTGTGCTTGATTTTGTCAATGGTGGTCACCTTTTCTTTCAGCTTTATCGCCAAGGCCTATTCAGGGAGGATTTGGCACGCTTTTATGCTGCAGAGATTGTTTCTGCTGTTTCTCATCTTCATGCAAATGGCGTAATGCACAGGGATCTTAAACCTGAAAATATTCTTCTGGATGCACATGGCCATGTAGTGTTGACAGATTTTGGCCTGGCTAAGCAATTCGATGAGAATCCTCGGTCAAATTCTATGTGTGGAACTTTAGAATACATAGCCCCTGAAATTATTTTGGGGAATGGACATGATAAGTCTGCTGACTGGTGGAGTGTGGGAATTCTACTGTTTGAAATGCTTACGGGGAAGCCTCCCTTCATCAGTGGAAATAGACAAAAGATCCAGCAAAAGATAATTAAGGACAAGGTCAAGCTTCCAGCGTTTTTGTCAAGTGAGGCACATTCACTGTTAAAAGGGCTGTTGCAGAAAGAAGCCAGCAAGCGCCTTGGCTGTGGACCAAGTGGTGATGAGATGATAAAGAGCCACAAGTGGTTTAAGTCAATTAACTGGCAGAAATTAGAAGCTCGCGAAATTAGGCCTAGCTTTGCTCCAGAAGTTGCAGGAAAATACTGTGTTGCTAACATTGAGGACCGGTGGACTAACATGCCTGTGCTGGATTCTCCTGCTGCTACTCCCAAATTCGAAGACAACCCCTTCAAGGGCTTCAATTGGATACTCTAG 1407 0.4279 MVSPQYSTLEGNCCQKPFLKQLLLPSESPDVFRSDSLEFDFSDVFGPAPVPATKELCSEKSRNFVAAPNPNENIYNDPAVIHSRSHSVVGPTSYISQCLKLTKINYLETEDALDLVEEVCREQQKGFKEGKSNEQLNNISYNYRSVGLEDFEVLKVVGQGAFGKVYQVRKRGTSDIFAMKVMRKDKIMQRNHAEYVISERDILSKVDHPFIMRLRYSFQTKYRLYLVLDFVNGGHLFFQLYRQGLFREDLARFYAAEIVSAVSHLHANGVMHRDLKPENILLDAHGHVVLTDFGLAKQFDENPRSNSMCGTLEYIAPEIILGNGHDKSADWWSVGILLFEMLTGKPPFISGNRQKIQQKIIKDKVKLPAFLSSEAHSLLKGLLQKEASKRLGCGPSGDEMIKSHKWFKSINWQKLEAREIRPSFAPEVAGKYCVANIEDRWTNMPVLDSPAATPKFEDNPFKGFNWIL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0800 468 FunFam Non-specific serine/threonine protein kinase 231 426 - -
Bisa09g0800 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bisa09g0800 468 FunFam Non-specific serine/threonine protein kinase 148 251 - -
Bisa09g0800 468 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Bisa09g0800 468 CDD STKc_AGC 157 407 IPR045270 GO:0004674|GO:0005524
Bisa09g0800 468 SMART serkin_6 151 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0800 468 SUPERFAMILY Protein kinase-like (PK-like) 137 451 IPR011009 -
Bisa09g0800 468 PANTHER RIBOSOMAL PROTEIN S6 KINASE 119 464 - -
Bisa09g0800 468 Gene3D Transferase(Phosphotransferase) domain 1 231 426 - -
Bisa09g0800 468 Pfam Protein kinase domain 151 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0800 468 Gene3D Phosphorylase Kinase; domain 1 148 448 - -
Bisa09g0800 468 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bisa09g0800 468 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bisa09g0800 468 ProSiteProfiles Protein kinase domain profile. 151 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0800 Bisa-ChrBisa09 11564111 11566939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0800 1 467 AGC Kinase Gene Family AT3G08720 62.712 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Bisa09g0800 Pkinase 3.9e-75 CL0016