LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g0792	ATGTTCAAGAGGAAGAGCATGATCGTGAGAGAGCTGGTTCAGGGTCACGACTCTGTTTCTCAGCTCAAGCTTCTGCTTCAAAAGCCTTTTGGGCCTGATGGGCCTCAAGCCGCAGATGAACTCCTCGCGAAAATCTTGAGATCTTTCACCCAAAGTCTTTCCCTTCTCACTTCCTCCGATGCCGGCGGTGGGGCTGGTCAGAATCCTGCGATTTCCGGTGAGAATGGGCCGTCGGCGGTGACTTCGTGCAATGATTGGAGGGCTGAGGATTCCGGCGAGAGTGGGAAGAGATCGCCGCCGGCTACGAAGGATCGGAGAGGCTCCTACAAAAGAAGGAGGACTGCAGATACATGGACCAAATTCTCCCACACTACTGATGATGATCATGCATGGAGGAAATACGGACGAAAGAAAATTCTCAACTCTAAATTCCCCAGGAGTTACTTCAGGTGCACCCGCAAATATAATCAAGGCTGCAAGGCTGTGAAACAGGTTCAGCGGATACAGGAGAATCCAGCAGTGTACAAAACAACGTACATTGGATCTCACACATGCAAACACATCCTCCAAGCTCCCGAACTGGTCGCAAATTCTGGTAATTTAGAATCACATATTGTGCCCGAATCTGAGGTACCAAACGATGATCAAAAGGTGGATTGTCCTTCTGTGATAACCACTTCATTAACCCCAACCATAAAGCAAGAATATTCCACAGAAGAGACACCCCTAAGTGATGTAACAGACAACTTGGACACTGGTCTGTGGTCAGATCTGAAAGACTTTGAACTTTCCGAGCTTTCAACCTCAAAGATGGCGTCTAATAATGCAGACACTGTATATTCATGTACTGTAGGCACTATGGATTTTGGGGTGGAATCTGTTGGCTTTAGCACTGATCATTTTCACTTTGATTGA	915	0.4732	MFKRKSMIVRELVQGHDSVSQLKLLLQKPFGPDGPQAADELLAKILRSFTQSLSLLTSSDAGGGAGQNPAISGENGPSAVTSCNDWRAEDSGESGKRSPPATKDRRGSYKRRRTADTWTKFSHTTDDDHAWRKYGRKKILNSKFPRSYFRCTRKYNQGCKAVKQVQRIQENPAVYKTTYIGSHTCKHILQAPELVANSGNLESHIVPESEVPNDDQKVDCPSVITTSLTPTIKQEYSTEETPLSDVTDNLDTGLWSDLKDFELSELSTSKMASNNADTVYSCTVGTMDFGVESVGFSTDHFHFD	304

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g0792	304	ProSiteProfiles	WRKY domain profile.	126	183	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa09g0792	304	MobiDBLite	consensus disorder prediction	60	88	-	-
	Bisa09g0792	304	Gene3D	WRKY domain	113	187	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa09g0792	304	SUPERFAMILY	WRKY DNA-binding domain	123	186	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa09g0792	304	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	14	208	IPR044810	GO:0003700
	Bisa09g0792	304	SMART	WRKY_cls	125	187	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa09g0792	304	MobiDBLite	consensus disorder prediction	89	113	-	-
	Bisa09g0792	304	Pfam	WRKY DNA -binding domain	126	186	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa09g0792	304	MobiDBLite	consensus disorder prediction	60	113	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g0792	Bisa-ChrBisa09	11423431	11426926	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g0792	4	193	WRKY Transcription Factor Family	AT3G56400	43.455	4.26e-47	158

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa09g0792		WRKY	2.5e-22	CL0274