Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0739 ATGGGAGCTTACGATCAAGGTTCTAATATCACTTCTCTGCCGTTGGATTCATCTAGGAAGAGGAAAAGTCGGAGTAGACGAGACGGTTCTAAGTGTGTTGCTGAGACCCTTGCAAAGTGGAAAGAATATAATGAGCATATTGAAACTTCCAAAGGTGACAGTAAACCAACTCGCAGAGCCCCAGCCAAGGGTTCAAAGAAAGGATGTATGAAAGGTAAAGGAGGGCCTAACAACTCACAATGTAACTACAGAGGAGTTAGGCAGAGAACATGGGGGAAATGGGTTGCTGAGATTCGAGAACCGAACAGAGGAAGTAGGCTGTGGTTGGGTACCTTTTCTACTGCCTATGAAGCTGCTCTTGCATATGATGAAGCTGCTAGAGCGATGTATGGTCCTTGTGCCCGTCTCAACTTCCCCCACATATCAGATTATACGTCGTGCAGGGAATCAGTGAAGGACACTTCATCGGCTACAACTTTATCAAGTTCCTCAGTGGCAACTTCTGCAGGTTCGGACACAACTACAATATCGAATCATTCTGAGGTCTGTGCAGCTGAGGATGTAAAGTTGAATTTTCAACCTATAAAAATAAATGATGGGGATAATGCTCATCATGAAGCTGATGAAGTTGCCTCGGCAATTATCAAAGTGAAGTCAGAGCCAAAGGTTGAGCCTGTTGATCTCTCAGACCTTGACGGCAGGGATAGTCAAATTGTGGAGCCAGAAGCACATGACATCAAAAAGGATGCCAAGGATGAAAGTAAAGATCAGAATCAGATGGACTTTTCTTGGGTTGATAGTAATGATTTAGAGGGTAATTACTTGCAGAATTTCTCTATTGATGAGATGTTTGATGTGGATGAACTGTTGGGGGCGATAGACAACAACCCAATAGGTGACTCAGAGACGTTCGGCTTTGGTCAAATGGACCTTCCTGGAGATGGACATCTTAAGAGCGGGATCCCCTCAAGCTTATCCTATCAATTGCAAAACCCAGATGCCAAGCTGCTGGGAAGTCTGAACCATATGGGTGACTCAGATACGTTCGGTTTTGGTCAAATGGACCTTCCTGGAGACGGAAATCTTAAGAGCGAGATACCCTCAAGCTTATCCTATCAATTGCAAAACCCAGATGCCAAGCTGCTGGGAAGTCTCAATCATATGGAGCAGGCACCATCAGATGTTGATTACGGATTTGATTTCTTGAGAATAGAAGGGCCAGAGGACAATAGTGATGGAGGCGAAGGGCAGCAATATCTTGATTGTGGATTATCAGATCTGTAA 1284 0.4455 MGAYDQGSNITSLPLDSSRKRKSRSRRDGSKCVAETLAKWKEYNEHIETSKGDSKPTRRAPAKGSKKGCMKGKGGPNNSQCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFSTAYEAALAYDEAARAMYGPCARLNFPHISDYTSCRESVKDTSSATTLSSSSVATSAGSDTTTISNHSEVCAAEDVKLNFQPIKINDGDNAHHEADEVASAIIKVKSEPKVEPVDLSDLDGRDSQIVEPEAHDIKKDAKDESKDQNQMDFSWVDSNDLEGNYLQNFSIDEMFDVDELLGAIDNNPIGDSETFGFGQMDLPGDGHLKSGIPSSLSYQLQNPDAKLLGSLNHMGDSDTFGFGQMDLPGDGNLKSEIPSSLSYQLQNPDAKLLGSLNHMEQAPSDVDYGFDFLRIEGPEDNSDGGEGQQYLDCGLSDL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0739 427 MobiDBLite consensus disorder prediction 17 31 - -
Bisa09g0739 427 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Bisa09g0739 427 Gene3D AP2/ERF domain 82 141 IPR036955 GO:0003700|GO:0006355
Bisa09g0739 427 MobiDBLite consensus disorder prediction 155 175 - -
Bisa09g0739 427 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 346 - -
Bisa09g0739 427 MobiDBLite consensus disorder prediction 44 83 - -
Bisa09g0739 427 MobiDBLite consensus disorder prediction 1 31 - -
Bisa09g0739 427 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 MobiDBLite consensus disorder prediction 1 16 - -
Bisa09g0739 427 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Bisa09g0739 427 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 CDD AP2 81 140 IPR001471 GO:0003700|GO:0006355
Bisa09g0739 427 MobiDBLite consensus disorder prediction 44 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0739 Bisa-ChrBisa09 10827685 10828968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0739 8 343 AP2-EREBP Transcription Factor Family AT2G40340 42.982 1.43e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g0739 AP2 3e-14 CL0081