Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0726 ATGGCTCCCAACCTCGAATGTCGCATGTATGAGGCCAAGTACCCGGAGGTCGACATGGCCGTCATGATACAGGTCAAGAACATTGCCGATATGGGCGCCTACGTCTCATTGCTCGAGTACAACAACATCGAGGGCATGATCCTGTTCTCCGAGCTCTCTCGCCGTCGGATTCGCAGTGTTAGCAGCCTCATCAAGGTGGGCCGCATCGAGCCTGTCATGGTCCTCAGGGTCGACAAGGAAAAGGGCTACATCGATTTGAGCAAGAGAAGGGTCTCTGAAGAGGATATTCAGGCTTGTGAGGAGAGGTACAACAAAAGCAAGCTTGTTCACTCCATTATGCGCCATGTTGCTGAGACTGTGGATGTCGATTTAGAGGAGCTGTATGTTCACATTGGATGGCCCTTATACCGCAAATATGGTCATGCTTTTGAGGCATTTAAAATAATTGTGACCGATCCTGATTCAGTTTTGAATTCCCTCACCTGTGAAATCAAGGACCCTGATGGGAAGGAGGCGACCAAAGTGGTTCCAGCAGTGTCAGAACAAGTGAAGGAAGCTCTAGTAAAGAACATTAGAAGAAGAATGACACCCCAACCCTTGAAAATAAGGGCAGATATTGAAATGAAATGTTTTCAGTTTGATGGAGTTCTTCACATTAAGGAGGCTATGCGGAGAGCAGAAGCTGCTGGAAATAATGACTGTCCTGTAAAAATCAAACTTGTTGCTCCCCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAGCAAGGAATATTAATTCTCAACAATGCTATTGTTGCTTGCACTGAAGCAATAGAGAAACACAAGGGTAAACTTGTCGTGAAAGAGGCACCAAGAGCTGTGAGTGAGCGTGATGACAAATTGCTTGCTGAACACATGGCCAAGCTGCGCCAAGATAATGAGGAAGTCAGTGGCGATGAAGATAGCGAGGAAGAAGAAGATACAGGAATGGGAGAGGTTGATGTGGAGAACCAGAATTCTGGGATAACAGACTGA 1020 0.4647 MAPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETVDVDLEELYVHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTCEIKDPDGKEATKVVPAVSEQVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRRAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILILNNAIVACTEAIEKHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGEVDVENQNSGITD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0726 339 Gene3D - 3 91 IPR012340 -
Bisa09g0726 339 FunFam Eukaryotic translation initiation factor 2 subunit 1 200 322 - -
Bisa09g0726 339 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Bisa09g0726 339 MobiDBLite consensus disorder prediction 311 327 - -
Bisa09g0726 339 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Bisa09g0726 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 328 IPR011488 GO:0003723|GO:0003743
Bisa09g0726 339 SMART S1_6 16 89 IPR022967 -
Bisa09g0726 339 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 255 IPR011488 GO:0003723|GO:0003743
Bisa09g0726 339 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 193 IPR024054 -
Bisa09g0726 339 SUPERFAMILY Nucleic acid-binding proteins 7 89 IPR012340 -
Bisa09g0726 339 Gene3D EIF_2_alpha 200 322 IPR024055 -
Bisa09g0726 339 SUPERFAMILY eIF-2-alpha, C-terminal domain 198 314 IPR024055 -
Bisa09g0726 339 FunFam Eukaryotic translation initiation factor 2 subunit alpha 4 91 - -
Bisa09g0726 339 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Bisa09g0726 339 MobiDBLite consensus disorder prediction 291 339 - -
Bisa09g0726 339 FunFam Eukaryotic translation initiation factor 2 subunit alpha 92 194 - -
Bisa09g0726 339 Coils Coil 301 321 - -
Bisa09g0726 339 SUPERFAMILY eIF2alpha middle domain-like 91 194 IPR024054 -
Bisa09g0726 339 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0726 Bisa-ChrBisa09 10648339 10652671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0726 2 339 Eukaryotic Initiation Factors Gene Family AT5G05470 79.765 0.0 515