Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0714 ATGTGCAGCTGTCCTGCTCTGTTTCTTCACTGCACAGCAATCACCTTCCTTTCTTTCTCTATAAATATTCCACACTTCCACACTCCACCGCCCCTTTCCACCATTGACACACCTGACATCCACCCCCTCCCACCCTCTGAACGAGGCAGCCACAGAGTGGTCTCCATCTTCCATCTTTTTAAACCTCCAATGGACGCTCCTCCTGCTCATGAGCCTCACCCTCCCCGAGAAACCCTACCCTGCTCCTCCTCCATAGCTCCTACACCCACTCCCTGCGAAACGACGTCGAATCATAATAACCCCAACCCCAAAAGCACTACTCGCAAATGTAAGGGCAAGGGTGGTCCTGACAACAACAAATTTAGATACCGAGGAGTGAGGCAACGAAGCTGGGGCAAGTGGGTGGCCGAGATCCGAGAGCCCCGCAAGCGAACCCGAAAGTGGCTCGGCACTTTCGCCACCGCCGAGGACGCCGCCCGAGCCTACGACCGCGCCGCCCTCATCCTCTACGGCTCCAGGGCTCACCTCAATTTGCAACCCTCTCCCACCTCTTCTTTTTCCCACAATAGCTCCTCTCGTGCCTCCAATTCTTCTTCCTCCACTCAAACCCTAAGGCCCTTGCTTCCCCGCCCCTCCGGCTTCGGCTTCACCTTACCTTCCTCACTTTCCTCTCCTCACGCCGCCGGATCATCGGGCTTCATACCCAACGGGGTTTACCCCAATTTTAATAATAATAATAATAATATCCTGCAGGTGGCGTGCCCTATGAATAATAACATAGCACAACAGCATCAAGTGGTGTCACTACAACACAAAGCACATCGATCTCTGGAATCTGGTAATGGGAGTGTAGGAGGTGGAGATATTGTTGACAACTCCAACCCGTCAACCTCGTACCAGAATTTTCATAGTCATAATCGTTGTCAGCAGCAACAGAATCGGATGAATCAACAGCAATACCAAAATTGCATGTACGATGATGTCAGCTGCTCAATGGGGGGATCGGTTGGGGCAAGCTTGTGTTCTTCGCAGGCACAGACCGTAGTTGCACCGGCGGATCCACAGGTGGGGCTGGCGGAGGCGGTTGGTCTGGGGACGTGGCCGTTGGCCAGTGAGGAAGAGTACCCACCGAGTCTTTGGGACTATAACGATCCCTTCTTCTATGATTTTTAA 1173 0.5303 MCSCPALFLHCTAITFLSFSINIPHFHTPPPLSTIDTPDIHPLPPSERGSHRVVSIFHLFKPPMDAPPAHEPHPPRETLPCSSSIAPTPTPCETTSNHNNPNPKSTTRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAHLNLQPSPTSSFSHNSSSRASNSSSSTQTLRPLLPRPSGFGFTLPSSLSSPHAAGSSGFIPNGVYPNFNNNNNNILQVACPMNNNIAQQHQVVSLQHKAHRSLESGNGSVGGGDIVDNSNPSTSYQNFHSHNRCQQQQNRMNQQQYQNCMYDDVSCSMGGSVGASLCSSQAQTVVAPADPQVGLAEAVGLGTWPLASEEEYPPSLWDYNDPFFYDF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0714 390 SUPERFAMILY DNA-binding domain 122 180 IPR016177 GO:0003677
Bisa09g0714 390 MobiDBLite consensus disorder prediction 180 210 - -
Bisa09g0714 390 MobiDBLite consensus disorder prediction 81 107 - -
Bisa09g0714 390 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
Bisa09g0714 390 Gene3D AP2/ERF domain 121 179 IPR036955 GO:0003700|GO:0006355
Bisa09g0714 390 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 96 319 - -
Bisa09g0714 390 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Bisa09g0714 390 MobiDBLite consensus disorder prediction 277 311 - -
Bisa09g0714 390 CDD AP2 122 181 IPR001471 GO:0003700|GO:0006355
Bisa09g0714 390 MobiDBLite consensus disorder prediction 286 311 - -
Bisa09g0714 390 MobiDBLite consensus disorder prediction 64 122 - -
Bisa09g0714 390 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Bisa09g0714 390 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Bisa09g0714 390 MobiDBLite consensus disorder prediction 180 207 - -
Bisa09g0714 390 FunFam Ethylene-responsive transcription factor 2 122 180 - -
Bisa09g0714 390 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0714 Bisa-ChrBisa09 10513434 10514606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0714 95 390 AP2-EREBP Transcription Factor Family AT2G40220 44.444 4.68e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g0714 AP2 8.8e-13 CL0081