Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0713 ATGTCAAGCCAAGATACTCAGGGGTTCACATGGCACTACACAGAGCTGGATGACCGAAACCTCGAAATCCGAGGCCGAACTTTTTTCTTCATCATCGTGCTCTTCTCCATTATACTTCTCGTGACCCTTCTCTTTCTCTACGCTCGCTGGATCTGGCGGTACCGGGGCAACCTTCCCACCATCAACTACGATTCCAACCAAACGCGCCACGCGCCGCCGCCTCCTCCGCCGCAGGGCCTCGACCCTGCTTCGATCAAGAAATTGCCGATAATTTTGCACCAGAAGAAGTCAGATCCGAACTGTAAATTGGAGGAAACAGAGTGCTGTATTTGCCTGGGCGCGTTCAAAGATGGAGATAAATTGAAGGTTTTGCCTGGCTGTGAACATAGTTTTCATGGTGAGTGTGTTGATAAGTGGCTTTCTAATCACTCTAGTTGCCCTCTCTGCAGATCATCTCTCAGGGTTCATTCTTCCTTCCCCAAGATTTTGATTCAAGAACCACCAAGTAGAATCAGTCTTCCTTTGTAG 528 0.4886 MSSQDTQGFTWHYTELDDRNLEIRGRTFFFIIVLFSIILLVTLLFLYARWIWRYRGNLPTINYDSNQTRHAPPPPPPQGLDPASIKKLPIILHQKKSDPNCKLEETECCICLGAFKDGDKLKVLPGCEHSFHGECVDKWLSNHSSCPLCRSSLRVHSSFPKILIQEPPSRISLPL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0713 175 SMART ring_2 108 149 IPR001841 -
Bisa09g0713 175 FunFam RING-H2 finger protein ATL66 72 155 - -
Bisa09g0713 175 SUPERFAMILY RING/U-box 100 156 - -
Bisa09g0713 175 CDD RING-H2_EL5-like 107 150 - -
Bisa09g0713 175 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Bisa09g0713 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 155 IPR013083 -
Bisa09g0713 175 Pfam Ring finger domain 107 150 IPR001841 -
Bisa09g0713 175 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0713 Bisa-ChrBisa09 10496589 10497116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0713 2 158 C3H Transcription Factor Family AT3G11110 43.902 3.46e-36 121