Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0681 ATGGCTTCTGCCTACCGCGACCGCACGTCGGAGTTTCGATCACTGACCGAGACCCTGAAGAAGATCGAGGGAGTCGCATCACCTAATCAAGCTGATAATGTTCCCTCTACATCAAAACAATCCTCCACCACATCCTATTCTAGATCTGAATTCAACAGGAAGGCTTCTCGAATCGGCTTGGGTATCCATGAAACCACCCAGAAGATTTCAAGGCTTGATCAATTGGCCAAGAAGTCATCAATGTTTAATGATCCAATGGTGGAAATACAAGAATTGACGTCTTTGATTAAGAATGATATTACGGCATTGAATACTGCTCTTTCTGATTTACAAACTATTCAAAACATAGAGATAGCTGACGGAAATTATTCAGAGGATATAATTGCTCATTCAACAGCTGTTTGTGATGACTTAAAGAGCAAACTTATGGGGGCAACAAAGCGGCTTCAAGATGTCTTAACTACCAGGACAGAGAATATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCCAAAAATGCATCACGAGACAATCCTTTCCGGCATCAGTCAAAGCCAGTGACTGAGCCACCCCCTTGGTCAAATTCGTTAAATCCATCTGAAAGCTCACAAGAAACATCAGCATTCCTCTCAAATGAAGTTCCAGCTGGCAGTCAATTAAGACGAAGGTTAGCTGTGGACAACACTCCATCCCAGCAAATGGAAATGTCTATGGTACAGCAGGTTGTCCCACGGCAAGAAAGTTATAGTCAGAGTCGGGCATCAGCTCTGCATAATGTGGAATCTACTATCACTGAACTCAGTGGGATCTTCACTCATTTGGCTACAATGGTTGCTCATCAAGGGGAATTAGCTATCAGAATTGATGACAACATGGATGAGACATTGGTAAATGTTGAAGGAGCTCACAGTTCTCTATTGAGGCATCTCAGCCAAATATCATCAAATAGGTGGCTTCTAATCAAGATATTTGCCATTCTGATACTTTTTCTGTTGGTCTTCATATTCTTCGTGGCCTAA 1020 0.4216 MASAYRDRTSEFRSLTETLKKIEGVASPNQADNVPSTSKQSSTTSYSRSEFNRKASRIGLGIHETTQKISRLDQLAKKSSMFNDPMVEIQELTSLIKNDITALNTALSDLQTIQNIEIADGNYSEDIIAHSTAVCDDLKSKLMGATKRLQDVLTTRTENIKAHENRKQIFSKNASRDNPFRHQSKPVTEPPPWSNSLNPSESSQETSAFLSNEVPAGSQLRRRLAVDNTPSQQMEMSMVQQVVPRQESYSQSRASALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDETLVNVEGAHSSLLRHLSQISSNRWLLIKIFAILILFLLVFIFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0681 339 SUPERFAMILY t-snare proteins 47 302 IPR010989 GO:0016020|GO:0016192
Bisa09g0681 339 MobiDBLite consensus disorder prediction 29 50 - -
Bisa09g0681 339 Pfam SNARE domain 284 335 IPR000727 -
Bisa09g0681 339 MobiDBLite consensus disorder prediction 163 215 - -
Bisa09g0681 339 MobiDBLite consensus disorder prediction 23 50 - -
Bisa09g0681 339 PANTHER SYNTAXIN 45 333 IPR045242 -
Bisa09g0681 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Bisa09g0681 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Bisa09g0681 339 SMART tSNARE_6 242 309 IPR000727 -
Bisa09g0681 339 Gene3D - 45 302 - -
Bisa09g0681 339 CDD SNARE_syntaxin5 250 335 - -
Bisa09g0681 339 MobiDBLite consensus disorder prediction 188 214 - -
Bisa09g0681 339 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0681 Bisa-ChrBisa09 10027450 10031387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0681 1 339 SNARE and Associated Proteins AT5G05760 66.471 5.92e-153 431