Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0658 ATGGAAACTCTGTATCCATCCTATTTGATGTCAAAATCAAACTGGTTTGTGCAAGAGAGGCACAACTCAGAATGGAGTAGAGAAGAGAATAAGAGGTTTGAAAGTGCACTTGCCATATATGATGAGGACACCCCAGACCGATGGTTGAAGGTGGCAGCCATGGTCCCTGGGAAGACTGTGTACGATGTGATCAAACAGTACAGGGAATTAGAAGAAGATGTGTGTAAAATAGAAGCAGGGAGGGTTCCCATTCCTGGATATCTTCACAGTTGTGATGATGCCCATAGAAGGAGGCCTCCATCTTCTAAGGGTTGTGATCATGAGAGGAAGAAAGGGGTTCCCTGGACTGAAGACGAACACAGGCAATATGGAAAAGGAGACTGGAGAAATATCTCTAGGAATTTTGTAGTGACAAAGACTCCCACCCAAGTGGCAAGCCATGCTCAGAAATACTTCATAAGGCAAAAGCTTGGTGGAGGAGGGAAAGACAAAAGGAGACCTAGCATTCATGATATAACAATTGCTAGTAACACAGTAAGTACCACACCAGATATGAACAAGCCCCATGTATTTAACGTCTCTCCCATGCTCACCACTAGCATGCCAAAAGTACAACTCGACTGGAATCACCATGTTGATGAATATCGGTCACTCATGGTTTTCAACCCAAATCTTGACCATGTGTTCAGGCCATCTCTGGCTTCGAAGTCTCTTAATAAACTGCACGGGCAGGATCTCTATGACTGTGCTTTCCATGAGGGCCATAAGGACCTCAAAAATCCAGCTTTCAGGACTGCTCCTCTGGACTTCAAAAAGGAAGCTGTTTATGGTATTCATGCATTGTAA 846 0.4433 METLYPSYLMSKSNWFVQERHNSEWSREENKRFESALAIYDEDTPDRWLKVAAMVPGKTVYDVIKQYRELEEDVCKIEAGRVPIPGYLHSCDDAHRRRPPSSKGCDHERKKGVPWTEDEHRQYGKGDWRNISRNFVVTKTPTQVASHAQKYFIRQKLGGGGKDKRRPSIHDITIASNTVSTTPDMNKPHVFNVSPMLTTSMPKVQLDWNHHVDEYRSLMVFNPNLDHVFRPSLASKSLNKLHGQDLYDCAFHEGHKDLKNPAFRTAPLDFKKEAVYGIHAL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0658 281 Gene3D - 114 157 - -
Bisa09g0658 281 SUPERFAMILY Homeodomain-like 109 156 IPR009057 -
Bisa09g0658 281 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 18 214 IPR043363 -
Bisa09g0658 281 CDD SANT 114 152 IPR001005 -
Bisa09g0658 281 SMART sant 111 154 IPR001005 -
Bisa09g0658 281 SMART sant 21 73 IPR001005 -
Bisa09g0658 281 FunFam Transcription factor SRM1 17 84 - -
Bisa09g0658 281 SUPERFAMILY Homeodomain-like 23 78 IPR009057 -
Bisa09g0658 281 Gene3D - 17 84 - -
Bisa09g0658 281 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
Bisa09g0658 281 CDD SANT 24 70 IPR001005 -
Bisa09g0658 281 MobiDBLite consensus disorder prediction 93 113 - -
Bisa09g0658 281 ProSiteProfiles Myb-like domain profile. 17 71 IPR001005 -
Bisa09g0658 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 156 IPR017930 -
Bisa09g0658 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 155 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0658 Bisa-ChrBisa09 9654405 9655620 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa09g0658 Myb_DNA-binding 7.3e-06 CL0123