Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0642 ATGGTGATTGCCGACAACTCTCATGTTGTTGATGTAGTAGACAATGGTTGTCCACGGAGCTCCGTCGTCGTTGGCGGCGGCAGTGATGGGTATTCTTCAGAGACCAGTGAGAGGTCTGAGGCCGAGATTGTGGGAGGATCCGAAAAGGAGAGGGGATCCTCTGCGTCCGAGTGCACGTTGGAGGTGGATCTGGGAAGTTCGGTAGGAGAGGTTAAGGTACATTTAGATAAGGTGGAGAGGGATTGTAGGATTTGTCATCTGAGCATGGATATGACTAATCATGAATCCGGGACTTGCATTGAGCTGGGATGTTCTTGCAAGGATGATTTGGCTGCTGCCCACAAACACTGTGCTGAGGCTTGGTTCAAGATCAAAGGCAACAAAACCTGTGAAATCTGTGGATCAGTTGCACACAATGTAGTTGGTGCTTTTGAAGTTGAAACAGCAGAACAGTGGAATGAGGCAAATGATGCCTCTGTGGTACCAACAACTGGATTCGTGACCCCTTCAGGAACTCAAAATTTCTGGCAGGGGCGCCGCTTCCTGAATTTTCTGCTTGCCTGTATGGTCTTTGCGTTTGTCATTTCTTGGCTTTTTCACTTCAATGTGCCCTCATGA 618 0.4854 MVIADNSHVVDVVDNGCPRSSVVVGGGSDGYSSETSERSEAEIVGGSEKERGSSASECTLEVDLGSSVGEVKVHLDKVERDCRICHLSMDMTNHESGTCIELGCSCKDDLAAAHKHCAEAWFKIKGNKTCEICGSVAHNVVGAFEVETAEQWNEANDASVVPTTGFVTPSGTQNFWQGRRFLNFLLACMVFAFVISWLFHFNVPS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0642 205 ProSiteProfiles Zinc finger RING-CH-type profile. 74 140 IPR011016 GO:0008270
Bisa09g0642 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 142 IPR013083 -
Bisa09g0642 205 Pfam RING-variant domain 82 133 IPR011016 GO:0008270
Bisa09g0642 205 SUPERFAMILY RING/U-box 79 137 - -
Bisa09g0642 205 PANTHER ZINC FINGER, RING-CH-TYPE 33 204 - -
Bisa09g0642 205 SMART ringv_2 81 134 IPR011016 GO:0008270
Bisa09g0642 205 MobiDBLite consensus disorder prediction 24 54 - -
Bisa09g0642 205 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0642 Bisa-ChrBisa09 9531488 9533788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0642 25 205 C3H Transcription Factor Family AT5G05830 62.295 3.24e-71 213