Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0620 ATGGTAGCTTTTGATATTGAGCTAAGGGAAAGCAAGAGGCATATCACAATGAAGGCACTGATTCTGGTTGGAGGATTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTCCCAAAGCCTCTGGTTGATTTTGCTAACAAACCTATGATCCTGCACCAGATAGAGGCTCTTAAGGCTATTGGAGTTAGTGAAGTGGTATTAGCTATCAATTACCAACTAGAGGTGATGCTGAATTTTTTGAAGGAATTTGAGGCAAAGCTTGGCATCAAGATCACATGTTCCCAAGAAACTGAGCCACTGGGAACTGCAGGTCCCCTGGCTCTTGCCAGGGACAAGCTGATAGATGCCTCTGGAGAGCCTTTTTTTGTTTTTAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGCCTTCCATAAGGCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGATGAGCCATCAAAATATGGTGTGGTTGTTATGGAGGAGACCACAGGGAAGGTTGAGAAATTTGTGGAAAAACCAAAGTTATTTGTTGGTAACAAAATCAATGCTGGCATCTACCTTTTGAACCCCTCAGTTTTGAATCGAATTCAACTGAGGCCTACTTCTATTGAAAAAGAAGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATCGGACAACCACGGGACTATATCACTGGCTTGAGACTCTACTTAGAGTCACTGAGGAAAAAGTCTTCGTCTAAGTTGGCCAGTGGCCCTCACATTGTGGGTAATGTTATTGTGGATGACACTGCCAAAATTGGCGAGGGATGTCTTATTGGACCTGATGTCGCAATTGGTCCTGGCTGTGTTGTTGAGGCAGGTGTTAGGCTCTCTCGTTGCACAGTAATGCGAGGAGTTCGAATTAAAAGTCACGCTTGCATATCGAGCAGTATCATTGGGTGGCATTCCACTATCGGGCAATGGGCTCGTGTTGAAAACATGACTATTCTTGGAGAAGACGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTGAAGCCAGAGATAGTCATGTGA 1134 0.4418 MVAFDIELRESKRHITMKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVSEVVLAINYQLEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLIDASGEPFFVFNSDVISEYPLKEMIAFHKAHGGEASIMVTKVDEPSKYGVVVMEETTGKVEKFVEKPKLFVGNKINAGIYLLNPSVLNRIQLRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLESLRKKSSSKLASGPHIVGNVIVDDTAKIGEGCLIGPDVAIGPGCVVEAGVRLSRCTVMRGVRIKSHACISSSIIGWHSTIGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0620 377 CDD M1P_guanylylT_B_like_N 17 250 IPR045233 GO:0004475|GO:0005525|GO:0009298
Bisa09g0620 377 Gene3D Hexapeptide repeat proteins 251 373 - -
Bisa09g0620 377 Pfam Nucleotidyl transferase 18 246 IPR005835 GO:0009058
Bisa09g0620 377 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 17 376 - -
Bisa09g0620 377 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 328 IPR029044 -
Bisa09g0620 377 FunFam mannose-1-phosphate guanyltransferase beta 17 248 - -
Bisa09g0620 377 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 16 250 IPR029044 -
Bisa09g0620 377 Pfam Bacterial transferase hexapeptide (six repeats) 277 311 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0620 Bisa-ChrBisa09 9129974 9133344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0620 2 142 Eukaryotic Initiation Factors Gene Family AT3G02270 26.573 5.05e-08 53.1