LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g0619	ATGGAAGCGACGTCGTACAAGCTCCTCCTCTTCACGGCTGCGCTGCTGACGTGCGCCACTCTCGGAGTGTCCCTCACGCGCTGCCCGAACTGCGGCAACTCCACCGTACCCTACCCACTCAGCACATCACCCAGCTGCGGCGACCCCTCCTACTCGATCAGGTGCAGCTCCGGCTCACTCATATTCGATACCCTCAACAACTCCTATCCAATCGAGTCCATCAACCCGAAAACCCAGCGCCTCGTTATCCGACCCGCTTCTCTCATATCCAACACCTGCGTCACCACCGATAAAATCCATCAGGGCATCCAGCTCAACAATACCCTCCCCTTTAACATCACCAGCGGCAACACCATCATCTACCTCAACTGTACAGAAACGCTTCTCCAATCGCCGTTGAATTGCTCATCGGCCAGCTTGTGTCACACCTACATCAACGGCACCGCAGACTTGAGCCAGTGCCAGAACACGCCTCTGTGTTGCACGTTCCGGGCGGGCGGGTCCAGCAACTCGTACATGATTCGGGTCCGGGATGTTGGATGCAGCGCTTACTCAAGCTTCGTGAACTTGAACCCCGCTTCGCCGGTGAACCAGTGGCCTGAACCGGGGTTAGAGATTCAGTGGGTGTCGCCGCAGGAGCCGATCTGTGGGTCCCAGGCGGATTGTGAGGGCGGGAACTCCACTTGTGGGCCGGACCCCTCGAGGAATGGGATCAAAAGGTGCTTCTGTAACACCGACCTCGTGTGGGACCCTATCGATGGGGTGTGCGCTGAAAAGATTACTTGTCAAAGTCCGGATGGTTGTGGCGGCTCTACAGATCGAACTGCCCTTATAGCAGGTTTAACTTGCGGGATTGGAGCAGCCCTCATTCTAATCACTATTGCCGTTCTACTCTACAAACGACAGAGTCGTATCAATGAAGCGCGGGAGCGCCTAGCGAGAGAGCGCGAGGGCATCCTGAATGCAAGCGGGGGAGGCAGAGCCGCGAAGCTCTTCTCTGGCAAAGAGCTCAAGAAAGCCACAAACGACTTCTCCAGAGACCGCCTTCTCGGCACCGGAGGCTACGGCGAAGTCTACAAAGGCATTCTCCCAGACGGCACGGTCGTTGCCGTCAAATGCGCAAAGCTGGGGAACGCCAAAGGCACGGACCAAGTCCTAAACGAAGTTCGCATATTGTGCCAAGTCAACCACCGCAACCTCGTCGGTCTTCTGGGTTGCTGCGTGGAGCTAGAGCAGCCCACCATGGTGTACGAGTTCATAGAGAACGGCACTCTCCTCGACCATTTGCAAGATAGCAATATCCCCAAGGGCCGAGGCTTTCTCACTTGGGCCCATCGCCTTCAAATAGCCAACGACACGGCCCAAGGTCTCGCATACCTTCATTTCTCCGCTGTTCCTCCTATATACCATAGAGATGTCAAGTCTAGTAACATTCTGTTAGATAACAAATTAAACGCTAAGGTTTCGGACTTCGGCCTGTCCAGATTAGCCGAGACTGATTTGAGCCATATCTCAACTTGTGCTCAGGGGACTCTCGGGTATTTAGACCCTGAGTATTACAGGAATTACCAATTGACTGATAAGAGCGATGTTTATAGTTTCGGGGTGGTGTTGTTGGAGCTGCTGACGGCGCAGAAGGCTATAGATTTTACCAGGGCAGCAGACGATGTGAATTTGGCGGTTTATGTGCAGAGGATGGTTGAGGAAGAGAAGTTGATGGATGCGATTGATCCAATGTTGAAAAATGGAGCTACCTCTTTGGAATTGGAGACTATGAAGGCGTTGGCGTTGCTGGCTTTGGGATGCTTGGAGGAACGCAGACAGAACCGGCCTTCAATGAAGGAGGTCGCAGAGGAGATTGAGTATATCATTAGTATCGCTACAGCCAAAGATGCACAAAACTAG	1905	0.5365	MEATSYKLLLFTAALLTCATLGVSLTRCPNCGNSTVPYPLSTSPSCGDPSYSIRCSSGSLIFDTLNNSYPIESINPKTQRLVIRPASLISNTCVTTDKIHQGIQLNNTLPFNITSGNTIIYLNCTETLLQSPLNCSSASLCHTYINGTADLSQCQNTPLCCTFRAGGSSNSYMIRVRDVGCSAYSSFVNLNPASPVNQWPEPGLEIQWVSPQEPICGSQADCEGGNSTCGPDPSRNGIKRCFCNTDLVWDPIDGVCAEKITCQSPDGCGGSTDRTALIAGLTCGIGAALILITIAVLLYKRQSRINEARERLAREREGILNASGGGRAAKLFSGKELKKATNDFSRDRLLGTGGYGEVYKGILPDGTVVAVKCAKLGNAKGTDQVLNEVRILCQVNHRNLVGLLGCCVELEQPTMVYEFIENGTLLDHLQDSNIPKGRGFLTWAHRLQIANDTAQGLAYLHFSAVPPIYHRDVKSSNILLDNKLNAKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQKAIDFTRAADDVNLAVYVQRMVEEEKLMDAIDPMLKNGATSLELETMKALALLALGCLEERRQNRPSMKEVAEEIEYIISIATAKDAQN	634

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g0619	634	Gene3D	Phosphorylase Kinase; domain 1	308	419	-	-
	Bisa09g0619	634	ProSiteProfiles	Protein kinase domain profile.	344	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa09g0619	634	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	468	480	IPR008271	GO:0004672\|GO:0006468
	Bisa09g0619	634	CDD	STKc_IRAK	350	621	-	-
	Bisa09g0619	634	Gene3D	Transferase(Phosphotransferase) domain 1	420	633	-	-
	Bisa09g0619	634	SMART	serkin_6	344	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa09g0619	634	FunFam	Wall-associated receptor kinase-like 20	420	633	-	-
	Bisa09g0619	634	Pfam	Wall-associated receptor kinase galacturonan-binding	28	83	IPR025287	GO:0030247
	Bisa09g0619	634	FunFam	Wall-associated receptor kinase-like 20	306	419	-	-
	Bisa09g0619	634	Pfam	Protein tyrosine and serine/threonine kinase	347	619	IPR001245	GO:0004672\|GO:0006468
	Bisa09g0619	634	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	25	623	IPR044652	GO:0004672
	Bisa09g0619	634	ProSitePatterns	Protein kinases ATP-binding region signature.	350	372	IPR017441	GO:0005524
	Bisa09g0619	634	SUPERFAMILY	Protein kinase-like (PK-like)	329	620	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g0619	Bisa-ChrBisa09	9122579	9125203	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g0619	27	626	Receptor kinase-like Gene Family	AT5G02070	54.472	0.0	669

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Bisa09g0619		PK_Tyr_Ser-Thr	5e-45	CL0016