Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0611 ATGGAGGAGTATGGTGAGTACGTGATGTGGGTGAAGAGAAAGCAAATGTTGAAGTCGTATATTGTTCAAAGCAAGACATGGGAAGAGAGGGCTTTTGCAGAGGACGCAGCCAGAGCTAGAGTACTTGGTGTTGGTGGGTGCGTATGGCCTCCTAAGTCTTACTCTTGTACTTTCTGCACAAGAGAGTTCAGGTCTGCTCAAGCTCTGGGAGGTCACATGAATGTCCACAGAAGAGACAGAGCTAGGCTTCAACAAAGTCCTAGCCCCCCCAGCCTCTCATCATCAGAAGAAAAAACTGGTCACCAAATCATGTTTCCTGATTCCCAATCAGAGGATCATGTTGAAACTGATTTGTCTGTGGGATTGAATTCCATGTTTGGTCGAGGTTGTAATAAGAGACCTAAGGCTTCAGTTTCTTCTTCACTGAAGCCGTGTCCAAATGAGAGGCTACCTGCTCTTCATTCTGCAGAAATATTGGAGGACTTGGATCTTGAACTCAGACTGGGGAAGCCACAGAAAGTAGTTTAA 528 0.4583 MEEYGEYVMWVKRKQMLKSYIVQSKTWEERAFAEDAARARVLGVGGCVWPPKSYSCTFCTREFRSAQALGGHMNVHRRDRARLQQSPSPPSLSSSEEKTGHQIMFPDSQSEDHVETDLSVGLNSMFGRGCNKRPKASVSSSLKPCPNERLPALHSAEILEDLDLELRLGKPQKVV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0611 175 MobiDBLite consensus disorder prediction 79 100 - -
Bisa09g0611 175 Pfam C2H2-type zinc finger 54 78 - -
Bisa09g0611 175 PANTHER OS07G0101800 PROTEIN 23 172 - -
Bisa09g0611 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Bisa09g0611 175 SMART c2h2final6 54 76 IPR013087 -
Bisa09g0611 175 MobiDBLite consensus disorder prediction 84 100 - -
Bisa09g0611 175 Gene3D Classic Zinc Finger 49 114 - -
Bisa09g0611 175 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
Bisa09g0611 175 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0611 Bisa-ChrBisa09 8960422 8960949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0611 1 174 C2H2 Transcription Factor Family AT5G06070 36.404 1.64e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa09g0611 zf-C2H2_6 7.5e-06 CL0361