LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g0605	ATGAGGATGACGACGTTGATAAGCGTTGGGGCGAAAGAGGAGGAGAGGACTGAGGAGGAGGAGGAGAGTGGATGTGACTTATCTAATCCGGAGGAATTTATGTGATCTGAATCTAGCAAACAAAGAACCAAGAGCTACGCATCCAGAGAGCAAGGAAGATTTCTCACTATCGACAACTTTTCAAACATGGCGAATCGGTGGTGGGCTGGAAATGCGGCAATGAGACCCACCGACCCCATGTCGTCTTCTCCGTCACTTCAGCTCAGAAATCCGGAAGATGGCCATGGTGGGTTCAATCGTCTCGGACCCAGACGAGAGCAAGAATTCATGGATAACCCCAATACCAACACCAACGCGACCCCAACTAATAGCAGCAATAGCAACACAAACCTCAACGCCCAAAACGCCGAAGACGATGATAGCCGCGACAACGAGCGCGAAGCCGACGACCAAAACCCCGGTAGCCACGAAACTGCCGAGCCCGGCAGCAGCGGCGGCCGCCGGCCCCGTGGCCGTCCGCCGGGGTCGAAGAACAAGCCAAAACCCCCCATCGTTATAACCAAAGAAACCCCCAACGCGCTTCGGAGCCACGTGTTGGAAATCGGCAGCGGCAGTGATGTCGCCGAGAGTATTGCCACCTTCGCCAATCGCAGGCACCGAGGGGTATCGGTGCTTAGTGGAAGCGGCATTGTGACCAATGTCACGCTCCGTCAACCGGCGGCGCCTGGTGGGGTAATCACACTTAATGGAAGGTTCGAGATACTGTCTCTATCTGGCGCGTTCTTGCCGGCGCCTTCGCCTCCCGGAGCCACCGGACTGACTGTGTATTTAGCAGGCGGACAAGGGCAGGTCGTCGGGGGGACTGTGGTGGGTTCTCTGGTGGCATCAGGGCCTGTGATGGTGATTGCAGCTACATTTGCTAATGCTACTTACGAGAGATTGCCATTAGAGGAAGAGGGAGGCGAGGAGATGCAAGTGCAGCAGCAGCAGCAACAGCAACAGCAGCAATCAGGAGTGAATTCAGGAAACACCGGAACTTCCGCATCACAAGGCATGGGCGAACAAGTTTCAATACCAGTGTACAATTTGCCTCCAAATCTGCTGTCAAATGGTCAAATGCCTCACGATGTGTTTTGGGGTCCTCCACCTCGCCCTCCTCCCCCATCTTACTGA	1173	0.5507	MRMTTLISVGAKEEERTEEEEESGCDLSNPEEFMXSESSKQRTKSYASREQGRFLTIDNFSNMANRWWAGNAAMRPTDPMSSSPSLQLRNPEDGHGGFNRLGPRREQEFMDNPNTNTNATPTNSSNSNTNLNAQNAEDDDSRDNEREADDQNPGSHETAEPGSSGGRRPRGRPPGSKNKPKPPIVITKETPNALRSHVLEIGSGSDVAESIATFANRRHRGVSVLSGSGIVTNVTLRQPAAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGTVVGSLVASGPVMVIAATFANATYERLPLEEEGGEEMQVQQQQQQQQQQSGVNSGNTGTSASQGMGEQVSIPVYNLPPNLLSNGQMPHDVFWGPPPRPPPPSY	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g0605	390	Gene3D	-	194	335	-	-
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	323	369	-	-
	Bisa09g0605	390	SUPERFAMILY	AF0104/ALDC/Ptd012-like	192	325	-	-
	Bisa09g0605	390	Pfam	Plants and Prokaryotes Conserved (PCC) domain	195	307	IPR005175	-
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	109	135	-	-
	Bisa09g0605	390	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	124	380	IPR014476	GO:0003680
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	136	154	-	-
	Bisa09g0605	390	FunFam	AT-hook motif nuclear-localized protein	194	322	-	-
	Bisa09g0605	390	CDD	DUF296	195	278	IPR005175	-
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	1	51	-	-
	Bisa09g0605	390	ProSiteProfiles	PPC domain profile profile.	191	327	IPR005175	-
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	314	390	-	-
	Bisa09g0605	390	MobiDBLite	consensus disorder prediction	65	186	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g0605	Bisa-ChrBisa09	8867244	8870883	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g0605	63	390	AT-hook Motif Nuclear Localized (AHL) Family	AT3G55560	52.802	2.21e-77	239