Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0580 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCACGCAATGGTTTGAATTCAAAAAATGGTATCACAAAAGAGGATGGTTTGAGCGGTTTAAGCAGCAAGATCTCCTCACCTTCTGTGCCTCCAACTCCCCGATCAGAGGGTGAGATCTTGAGCTCCTCCAATATGAAGAGCTTCAGCTTCAATGAGCTGAAAACTGCTACGAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGATTTGGCTGTGTATTTAAGGGGTGGATCGATGAGCATACGCATGCACCGGTTAAACCGGGAACTGGACTTGTCATAGCTGTGAAGAGGCTTAATCAAGAAGGCCATCAGGGACACAGTGAATGGTTGACAGAAATAAACTACCTGGGGCAGCTGCATCATCCCAATCTAGTGAAACTGATTGGTTACTGCCTGGAGGACGACCACCGGATTTTGGTATATGAATTTTTGGCCAAGGGCAGTTTGGATAATCATTTGTTTAGGAGGGCTTCTTACGTTCAACCACTTTCTTGGAGCATCCGCATGAAGGTTGCTCTTGATGCTGCCAAGGGTCTTGAATTTCTTCACAGCGACAAAGCACAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGCTTGATTCGAACTATAATGCAAAACTCTCTGATTTCGGGTTGGCAAAGGATGGACCAGCAGGTGATAAGAGCCATGTCTCCACAAGAGTAATGGGCACTTATGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACTTAACCAAGAGGAGTGATGTATACAGTTTTGGGGTGGTTCTGCTGGAAATGATATCAGGAAAACGTGCATTGGATAATAACAGGCCATCCGGGGAGCACAATTTAGTGGAATGGGCGAAGCCTCTCCTCACCAGCAAACGCCGAATTTCCCAAGTTATGGATGCTCGCATCGGAGGCCAGTACTCACAGCCTGAAGCCATGAAAGTGGCTAACCTTGCACATCAATGCCTGTCTGTAGAACCCAAGCTGAGACCAAACATGGAGGAGGTGGTCACAACATTGGAACAGCTTCAGGATTCTAGTGAAGCATCTACAGCGGTGGGTAGCGCACAAGATAAACCCAAAGGAAGTAGTGGTCATAGCTCAAGCAGCAGTGGTCCAAAGCAACATGGAACAAGTATCAATGGATCTTCTACTCCAACACCATGTGCTTCTCCTCTTCGTACGTAA 1236 0.4701 MGCCFSARIKAESPPRNGLNSKNGITKEDGLSGLSSKISSPSVPPTPRSEGEILSSSNMKSFSFNELKTATRNFRPDSVVGEGGFGCVFKGWIDEHTHAPVKPGTGLVIAVKRLNQEGHQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRASYVQPLSWSIRMKVALDAAKGLEFLHSDKAQVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKRSDVYSFGVVLLEMISGKRALDNNRPSGEHNLVEWAKPLLTSKRRISQVMDARIGGQYSQPEAMKVANLAHQCLSVEPKLRPNMEEVVTTLEQLQDSSEASTAVGSAQDKPKGSSGHSSSSSGPKQHGTSINGSSTPTPCASPLRT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0580 411 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Bisa09g0580 411 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0580 411 PANTHER OS01G0588500 PROTEIN-RELATED 43 360 - -
Bisa09g0580 411 MobiDBLite consensus disorder prediction 16 54 - -
Bisa09g0580 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa09g0580 411 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Bisa09g0580 411 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Bisa09g0580 411 MobiDBLite consensus disorder prediction 356 411 - -
Bisa09g0580 411 SUPERFAMILY Protein kinase-like (PK-like) 50 358 IPR011009 -
Bisa09g0580 411 CDD STKc_IRAK 80 359 - -
Bisa09g0580 411 MobiDBLite consensus disorder prediction 11 54 - -
Bisa09g0580 411 Gene3D Transferase(Phosphotransferase) domain 1 160 379 - -
Bisa09g0580 411 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Bisa09g0580 411 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0580 Bisa-ChrBisa09 8594432 8596829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0580 1 387 Glycoside Hydrolase AT3G07070 43.970 1.27e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa09g0580 PK_Tyr_Ser-Thr 2.5e-47 CL0016