Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0577 ATGAGAAAACCATGCTGTGACAAAGAAGGAACCAACAAAGGCGCTTGGTCTAAGCAAGAAGATCAAAAGCTTATTGATTACATCCGAGATCACGGTGAAGGTTGTTGGCGTTCCCTTCCCAAGGCTGCAGGGCTTCTTCGTTGCGGCAAAAGCTGCCGATTGAGATGGATCAACTATTTAAGACCCGACATCAAACGTGGAAACTTTGCCTCCGATGAGGAAGACCTCATCATCAAACTCCATGCCCTTCTTGGCAACAGGTGGTCACTAATAGCTGGAAGGTTGCCTGGGCGTACGGACAATGAGGTAAAGAACTATTGGAATTCACACATCAGACGGAAACTGATAAAGGTGGGAATTGATCCAAATAACCATAAGCCACACCATAGCTTTCCTCGTCCTCGTATCTCTGCGCCTGAACGTGAATCATCATCTGGGTCCATGAACAAACCGCATCACAGTGAAAAAATGCCCTTCGTCAATTCTTGTGGTGCTATCCCTAATGATAGGGTTTCAGACGCCGAGAGCTATCTTGAAGAAGAAAGCACACCAACGGGTTCGTCCCACTTGAATCTTGACCTAACCATTGCTTTCCCTTCTCCCACCTCACTTGATGTTGTACAAGACCACAAACCTGAGTCAAATTATTCTGAGTCTACTAGAACGAGGGACATGGAGATCTGTGAATCACCTCCAAACCTCCTTCTATTTATTTAA 717 0.4575 MRKPCCDKEGTNKGAWSKQEDQKLIDYIRDHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDIKRGNFASDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKVGIDPNNHKPHHSFPRPRISAPERESSSGSMNKPHHSEKMPFVNSCGAIPNDRVSDAESYLEEESTPTGSSHLNLDLTIAFPSPTSLDVVQDHKPESNYSESTRTRDMEICESPPNLLLFI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0577 238 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 173 - -
Bisa09g0577 238 MobiDBLite consensus disorder prediction 122 136 - -
Bisa09g0577 238 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Bisa09g0577 238 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bisa09g0577 238 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa09g0577 238 MobiDBLite consensus disorder prediction 122 156 - -
Bisa09g0577 238 CDD SANT 15 60 IPR001005 -
Bisa09g0577 238 Gene3D - 68 136 - -
Bisa09g0577 238 FunFam MYB transcription factor 67 128 - -
Bisa09g0577 238 MobiDBLite consensus disorder prediction 172 191 - -
Bisa09g0577 238 MobiDBLite consensus disorder prediction 204 223 - -
Bisa09g0577 238 FunFam MYB-related transcription factor 12 65 - -
Bisa09g0577 238 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bisa09g0577 238 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa09g0577 238 CDD SANT 72 111 IPR001005 -
Bisa09g0577 238 Gene3D - 13 65 - -
Bisa09g0577 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bisa09g0577 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bisa09g0577 238 SMART sant 65 113 IPR001005 -
Bisa09g0577 238 SMART sant 12 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0577 Bisa-ChrBisa09 8514445 8515543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0577 2 200 MYB Transcription Factor Family AT4G09460 55.769 1.71e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g0577 Myb_DNA-binding 7.9e-14 CL0123