Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0572 ATGGCCAGCGTAGATGAACGCTTAGAATTACCAGAGTTCTTTAAGATGGAAGAAGGAGTCCCCTCCACTACCTCCAACACTAACACCGCCTCTGCACCTCTCTCACCTCTAAAAATCATGGCACAAAAAATTTTTTTTTCTTCCTTCATAATCAATCTGAGTTGTGACCAGGTGGTCGCAGAATTTATCGGCACCTATTACTTGATATTCTCGGGGTGTGTAGTGGTGACAGTGAATAAAATCGACGGTTCTGTCACATTTCCAGGCATCTGCGTTACATGGGGCCTCGCCGTCATGGCGTTGATATACACTCTTGGTCATATATCTGGAGCACATTTCAACCCTGCAGTTACCATCACTTTAACTCTCTTCCGCCGCTTCCCCTTGAAGGAGGCGGCGCTATACATTGTGGCTCAGTTTGTGGGGGCGATACTAGCGAGTTGCACCATAGTAGGAATCTTTGATGTTACACCAGAATCTTATTTTGGAACCGTACCAGCTGGATCTAACGTCCAGGCTTTTGCCATGGAATTCTTGGCCACTTTTCTCCTCATGTTTGTTATCTGCGGTATTTCTACAGATGACAGAGCGCAAAGTGGGTTCATGGGGATTGTTGTTGGAATTACTATAACGGTCAATGTCTTCGTTGCTGGGCCTGTATCAGGAGCATCGATGAACCCAGCAAGAAGTATAGCACCTGCGATCGTGAAGCATGTTTACACGGGTTTATGGGCTTACATTGCAGGCCCAATTATGGGAGCCATATCTGCAGGACTTGTTTATCACTTCCTTAGGCTTAGAGCTTGA 807 0.461 MASVDERLELPEFFKMEEGVPSTTSNTNTASAPLSPLKIMAQKIFFSSFIINLSCDQVVAEFIGTYYLIFSGCVVVTVNKIDGSVTFPGICVTWGLAVMALIYTLGHISGAHFNPAVTITLTLFRRFPLKEAALYIVAQFVGAILASCTIVGIFDVTPESYFGTVPAGSNVQAFAMEFLATFLLMFVICGISTDDRAQSGFMGIVVGITITVNVFVAGPVSGASMNPARSIAPAIVKHVYTGLWAYIAGPIMGAISAGLVYHFLRLRA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0572 268 Gene3D Glycerol uptake facilitator protein. 25 267 IPR023271 -
Bisa09g0572 268 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 SUPERFAMILY Aquaporin-like 56 265 IPR023271 -
Bisa09g0572 268 CDD MIP 57 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 Pfam Major intrinsic protein 55 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa09g0572 268 PANTHER AQUAPORIN NIP2-1 40 266 IPR034294 -
Bisa09g0572 268 NCBIfam MIP family channel protein 60 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0572 Bisa-ChrBisa09 8443191 8444644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0572 56 265 Major Intrinsic Protein MIP AT5G37810 59.716 4.69e-89 264