Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0571 ATGGATTCTTCTTCTTCTTCTTCCGACGGTCACAATAGCCCCGACACCAATTTCGATGCTGATACGCCCCGCACGCCCACAGCCGTTCGCCGAGCCCTTCAACTTCTCCGATCCGACGACCCCGATTTTCGGCTTCAAGCCGCAAGGGATATCCGGTGCCTCACCAAGACTTCACAGCGCTGTCGGCGCCAGCTTGCTGAAGCTGTCGGTCCACTCGTTTCTATGCTCCGAGTCGACTCGCCCGAGTCCCACGAACCTGCTCTTCTCGCTTTGCTTAACCTTGCCGTCAAAGACGAAAGGAACAAAATCAACATTGTGGAAGCCGGTGCTTTGGAACCGATAATTAGTTTCGTCAAGTCACAAAATTTAAATCTGCGGGAGTGCGCAACTGCATCTTTGCTCACTCTGTCTGCCTCTACAACCAACAAGCCAATTATTAGTGCTTCTGGGGCGATTCCTCTTCTTGTGGAGGTTCTTAGAGATGGAAGCCCACAAGCTAAAGCTGATGCAGTGATGGCTCTTTCCAATTTATCCACATACCCAGATAATCTCAGCATCATTCTAGAAACAAGTCCAGTCCCTTACATAGTCGATCTTCTTAAAGCCTGTAAAAAGTCCTCAAAAACAGCTGAGAAATGCTGTGCTGTGATAGAATCCTTGGTGGGTTTTGATGAGGGAAGGACTGCCTTGACTTCTGAAGAAGGTGGGGTTCTTGCAGTTGTGGAGGTTCTTGAAAATGGCAATATCCAAAGTCGGGAGCATGCCGTTGGAGCACTACTAACAATGTGCCAAAGTGATCGGTGTAAATACCGGGAACCGATTCTCAGAGAAGGTGTAATTCCAGGACTTCTTGAGCTTACTGTTCAGGGGACGCCCAAGTCTCAGTTGAAAGCACGTACCCTTCTGCAGTTACTGAGGGAGTCTCCTTATCCAAGGTCTGAAATGCAACCTGACACTCTTGAGAATATAGTATGCAACCTCATATCACAGATTGATGGTGATGATCAATCTGGTAAAGCAAAGAAGATGCTATCTGAGATGGTCCAAGTCAGCATGGAGCAGTCTCTCAGACATTTACAGCAAAGGGCTCTTGTATGTACCCCAAGCGAACTTTCCATTTCCAACTGTGCTTCTGAAGTTCCTTCAAAATGA 1152 0.4783 MDSSSSSSDGHNSPDTNFDADTPRTPTAVRRALQLLRSDDPDFRLQAARDIRCLTKTSQRCRRQLAEAVGPLVSMLRVDSPESHEPALLALLNLAVKDERNKINIVEAGALEPIISFVKSQNLNLRECATASLLTLSASTTNKPIISASGAIPLLVEVLRDGSPQAKADAVMALSNLSTYPDNLSIILETSPVPYIVDLLKACKKSSKTAEKCCAVIESLVGFDEGRTALTSEEGGVLAVVEVLENGNIQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQLKARTLLQLLRESPYPRSEMQPDTLENIVCNLISQIDGDDQSGKAKKMLSEMVQVSMEQSLRHLQQRALVCTPSELSISNCASEVPSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0571 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 109 151 IPR000225 GO:0005515
Bisa09g0571 383 FunFam U-box domain-containing protein 4 14 365 - -
Bisa09g0571 383 Gene3D - 28 148 IPR011989 -
Bisa09g0571 383 SUPERFAMILY ARM repeat 28 333 IPR016024 -
Bisa09g0571 383 MobiDBLite consensus disorder prediction 1 23 - -
Bisa09g0571 383 SMART arm_5 223 264 IPR000225 GO:0005515
Bisa09g0571 383 SMART arm_5 97 138 IPR000225 GO:0005515
Bisa09g0571 383 SMART arm_5 139 179 IPR000225 GO:0005515
Bisa09g0571 383 SMART arm_5 58 96 IPR000225 GO:0005515
Bisa09g0571 383 SMART arm_5 180 222 IPR000225 GO:0005515
Bisa09g0571 383 MobiDBLite consensus disorder prediction 1 25 - -
Bisa09g0571 383 Gene3D - 149 346 IPR011989 -
Bisa09g0571 383 PANTHER U BOX DOMAIN-CONTAINING 27 312 - -
Bisa09g0571 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 192 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0571 Bisa-ChrBisa09 8435983 8439434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0571 21 306 U-box Gene Family AT2G23140 34.375 7.64e-42 153