Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0559 ATGGTTCTATTGCTTTCCATTTGCCACCTTTCTATGGAGCATGTCATCCACAACATATATTACACTATATCACACATATCCCCTCTTGAAGGCTTGGATAACCCATCTAGTATTGAGATGTGGAGTAAATCAGGATTTCTGTCCAATGAACGTGATCATAAGCAGAGTGCTAAAGATGTGGATGTTGATGATAACCAGCTGAAGACTAAGAAACATAACAGTAATGTACCTTCTGCAACAAAAATTACCAAAAAGATGAAATTGAAATTTACTAAAGCGTGGATTTCATTTCTTAGATTGCCACTTCCCCTTGATGTGTACAAGGAGGTCCTTGTTAACCTTCATCAAGCAGTTATTCCTTATCTGCCCAATCCTATTATGTTATGTGATTTCTTAACAAGATCGTATGATGTCGGTGGTGTTGTTAGTGTCATGGCTCTTAGCAGCCTTTTTGTCTTGATGACCCAGTATGGGTTGGAATACCCAAATTTTTATGAAAAACTCTACGCCCTCTTAGTTCCACCTATTTTTATGGCTAAACATCGAGCAAAGTTTTTTCAGCTTTTTGATTCTTGCCTTAAGTCGCCACTTCTTCCTGCTTACCTGGCGGCTTCATTTGCTAAGAAATTAAGCAGGCTGTTGCTTTCAGTTTCTCCTTCAGGAGCATTGATTATCATTGCTTTGATTCATAATCTTTTGCGAAGACATCCTTCAATCAACTGTTTGGTGCATCGGGAATATTGTGATGAAGAATCAAAAGATGATTCTAAAACAGATAAAGTAATTGCTCCTAAAATGGATGACTCCAAGACTGGTGCTATGCCCTGCCAGAAATCAGGCATTGATCATTTTAACTATGCAGAAGCTAATCCTAAGAACTCAAATGCGATGAGAAGTTCTCTTTGGGAGATCGATACCATTCTTCAGCATTACTGCCCTCCTGTTTCAAGGTTTGCTTTGTCTCTTGGGACTGATTTGACAGTGAGGGCCAAAACAAGTGAAGTGAACGTTGAAGACTTCAGTTCTGGTTCATATGCAACAATATTTAGAGAGGAGATAAGGCGGAGGGTAAAGCAGGTTCCCCTAGCGTTCTACAAGGCAACTCCTTCCTCCTTGTTTTCAGAGACCGATTTTGCTGGTTGGACTTTCAAATTGGAAGAAAAAGAAGCCCAGGAGATTTTTAATGACAATAATGAGAATGCTACTAGAGGTACATCGGAACATGATCACAGTCCTGCGAAACGACAAAGAATAGAGTTGTGTGAAGACAGTATTGGCAGTAACATTGCAAATTGGAGAAGTACCTCTGGCTGCAGAAAAGATGCCTGGACAGAAGAGGGAGATGAAGCTTCTCGGGGCTTGTATTCGAAAGTAAAGGGAACAAGACTTCTATTTTCTCAAATATCAGATCTTTTAATGAGTAACCCTGAAGCCAACCTGCTATCATCAGAGTCACACGTACATGTTGGTGAAGATGGCTCGACATTGGCAAAGAACCAAACAACAATTAATAAGCAAGAAGAACTGCAATTTAATAAGTGTCTGGTAAGTTCTGTTTATGTGGAATTAGAATCCTCTGTTCTGTTCTGGAAAGTTGACAAGATAAGAGAAAGCATATTGGGAAACGAAAGGAAGGCTCTATTTGATTTCATTTGTACTTTCAACATTGTATCTAGACTAAACAGGTGTCGGAAAAGCTGTAGACTGAGGTGGTTGAACTATCTAAGCCCCACTATCAACAGAGGGATCTTCACTGAGGATGAAATTGATATGATTCAAAGGTTCCATAAACTTATCGGGAACAGATGGTCATTGATTGCTGCAAGGCTTCCTGGAAGAACAGCTAATGATGTGAAGAACTTCTGGCACACCCACTTGCGCAAAAAGCATTCTCCATGGCTGAGAAGGAAACCTAGGCTGATCGCTAATGACAGTTGTAGCAGCAGCAGTAGTAGTACAGGACAGTTTGCTACCCCACTAGTGGCTGCAAAGGATGTTAATGTGTCTGTCTCTGCCAATGATAATAGCTATGAAGCAAAACGACCTGCAATGGAGAAGGGTGTCACAGAAACACAACCATGTGTTGCTGATTTTGCAGAGTCAGCGTCGTGGGAAGCTCTGTTGGAAGAGAAGGAATCAGGTAATGAGGGAGAGATGGAGTTCTCAAAAGCAATGAATGCTCATGATCTTCTTACGGATGACTTCTCTTGGGATGACAACCTTTGGGATTCTTCTCCTTGGGATCTTTAG 2250 0.408 MVLLLSICHLSMEHVIHNIYYTISHISPLEGLDNPSSIEMWSKSGFLSNERDHKQSAKDVDVDDNQLKTKKHNSNVPSATKITKKMKLKFTKAWISFLRLPLPLDVYKEVLVNLHQAVIPYLPNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYALLVPPIFMAKHRAKFFQLFDSCLKSPLLPAYLAASFAKKLSRLLLSVSPSGALIIIALIHNLLRRHPSINCLVHREYCDEESKDDSKTDKVIAPKMDDSKTGAMPCQKSGIDHFNYAEANPKNSNAMRSSLWEIDTILQHYCPPVSRFALSLGTDLTVRAKTSEVNVEDFSSGSYATIFREEIRRRVKQVPLAFYKATPSSLFSETDFAGWTFKLEEKEAQEIFNDNNENATRGTSEHDHSPAKRQRIELCEDSIGSNIANWRSTSGCRKDAWTEEGDEASRGLYSKVKGTRLLFSQISDLLMSNPEANLLSSESHVHVGEDGSTLAKNQTTINKQEELQFNKCLVSSVYVELESSVLFWKVDKIRESILGNERKALFDFICTFNIVSRLNRCRKSCRLRWLNYLSPTINRGIFTEDEIDMIQRFHKLIGNRWSLIAARLPGRTANDVKNFWHTHLRKKHSPWLRRKPRLIANDSCSSSSSSTGQFATPLVAAKDVNVSVSANDNSYEAKRPAMEKGVTETQPCVADFAESASWEALLEEKESGNEGEMEFSKAMNAHDLLTDDFSWDDNLWDSSPWDL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0559 749 Pfam CBF/Mak21 family 143 319 IPR005612 -
Bisa09g0559 749 SUPERFAMILY Homeodomain-like 561 631 IPR009057 -
Bisa09g0559 749 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 576 630 IPR017930 -
Bisa09g0559 749 Pfam Myb-like DNA-binding domain 581 626 IPR001005 -
Bisa09g0559 749 SMART sant 580 628 IPR001005 -
Bisa09g0559 749 SMART sant 499 577 IPR001005 -
Bisa09g0559 749 CDD SANT 584 626 IPR001005 -
Bisa09g0559 749 PANTHER NUCLEOLAR COMPLEX PROTEIN 4 11 383 IPR027193 GO:0042254
Bisa09g0559 749 MobiDBLite consensus disorder prediction 396 415 - -
Bisa09g0559 749 Gene3D - 583 629 - -
Bisa09g0559 749 ProSiteProfiles Myb-like domain profile. 576 626 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0559 Bisa-ChrBisa09 8216578 8232594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0559 560 630 MYB Transcription Factor Family AT1G66370 76.056 2.41e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa09g0559 CBF 2.5e-33 No_clan