Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0546 ATGGACTTTTCGTCTCTATCTCTATCGAAACGCAAACTGATTGATTCGTCATCTCTTTTACCATTTTCATCCTTCCTCTCTGGTGTAATCTCCGGGCCTACATTAGTAATATTACTCGAAGAATTTTCCTGTTATATTGTAAGTACAATGGCTTTGTCCTTGGACGATAGGATGAAGAACATAAGAAGAGAACGTGGCAGAGCTCGACGTGGCCGTGGACAAGGTGCTACTCTTGATGGAAGAATGACTGGTGCATCTCGTAGAGGTCCTCTTACAGTTAATGTTTGGCCATCATCTTCTGCCATTGTCAAGTCTACTCGCAAAACCAGGCCTTTTCCATGGCAGCATGATTTATTTGAAGATAGCCTAAGAGCTGCAGGGATACAAGGAGTAGAAATTGGCACAAAGTTGTATGTTTCCAACTTGAACAATGGAGTAACCAATGAAGATATAAGGGAACTTTTTTCTGAGATTGGAGACATGAAGCACTATGCAGTCTACTATGACAAAAATGGACATCCAAGTGGCTCGGCTGAAGTTGTCTATACCAGAAGAAGTGAAGCATTTGCTGCTCTTAAACGATACAATAATGTGCTTCTGGATGGAAAGCCCATGAAAATTGAGATTGTGGGTGCCAATGCGGAGTTTCCTATGACAGCCCGGGTGAACGTTACTGGTGTAAATGGGCGGAGGAAGAGGACAGTTGTGATGGCGCCTGGAGAAGGTCGAACCAGAGGATCTGCTAAGCTTAATCGTGGTGCTGGTCAAGGACGTGGCAATGGTGCAAGGAATGACGGAAGGAGTGATGGAAGGAGTGATGGAAGGAGTGGGGGTGGAGGCCGTGGAGGCCGTGGAAGTGTCAGAGGTCGACGCCGAAATCTTGTTTGGAGGAAGAGAGTTGAAAAGTCAGCAGAGGAGCTTAACCAGGAATTGGAGACCTATCATACTGAGGCCATCTCATGA 963 0.4569 MDFSSLSLSKRKLIDSSSLLPFSSFLSGVISGPTLVILLEEFSCYIVSTMALSLDDRMKNIRRERGRARRGRGQGATLDGRMTGASRRGPLTVNVWPSSSAIVKSTRKTRPFPWQHDLFEDSLRAAGIQGVEIGTKLYVSNLNNGVTNEDIRELFSEIGDMKHYAVYYDKNGHPSGSAEVVYTRRSEAFAALKRYNNVLLDGKPMKIEIVGANAEFPMTARVNVTGVNGRRKRTVVMAPGEGRTRGSAKLNRGAGQGRGNGARNDGRSDGRSDGRSGGGGRGGRGSVRGRRRNLVWRKRVEKSAEELNQELETYHTEAIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0546 320 Gene3D - 131 211 IPR012677 -
Bisa09g0546 320 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 52 317 - -
Bisa09g0546 320 CDD RRM_THOC4 135 209 - -
Bisa09g0546 320 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 137 205 IPR000504 GO:0003723
Bisa09g0546 320 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 135 212 IPR000504 GO:0003723
Bisa09g0546 320 Coils Coil 297 317 - -
Bisa09g0546 320 MobiDBLite consensus disorder prediction 237 290 - -
Bisa09g0546 320 SMART rrm1_1 136 208 IPR000504 GO:0003723
Bisa09g0546 320 SUPERFAMILY RNA-binding domain, RBD 129 209 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0546 Bisa-ChrBisa09 8062790 8067248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0546 134 243 Eukaryotic Initiation Factors Gene Family AT2G23350 32.203 1.41e-09 57.4