Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0543 ATGGGAAGGCAACCCTGCTGCGACAAGGTTGGACTGAAGAAGGGGCCTTGGACTGCAGATGAAGACAAGAAGCTCATCAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAGCTTGCAGGGCTGTTAAGGTGTGGGAAAAGTTGCAGGCTGAGATGGACCAACTACCTCAGACCTGACTTGAAGAGAGGCCTCCTCTCTGATTATGAAGAGAAAATGGTGATCGATCTCCATGCTCAACTTGGCAACAGATGGTCTAAGATTGCATCTCATCTGCCTGGAAGAACTGATAATGAGATTAAGAACCATTGGAATACCCACATAAAGAAGAAGCTTAAGAAGATGGGAATTGATCCTGTCACTCACAAGCCTCTCTCCACTGAACAACAACAACAACAACCTCAAACCCAACAAAAACATCATCAACAACAGCTTTCTTCTTTACCAGAGAAACTAGAGACTCCATCATTTGACTCATCCACCAATAACATCACTGAATTAACTGCTGCTGCTGTTCCTGCTACGACAGAGGAAGCTGGCAAGAATTACATGACACCCACACCTCCAACATTAATAGAGGACCCGTTACTACCAATGAATGGGTTCTGCACAGATGAAGTTCCAATTATACAACCCCATGAGATTCTGGTCCCATCTTCATCAACCTCCACTGCTACATCTTCTTCTTCTTCTTCCTCCCCTTCTTGTAACTCCTCCAATTCCAACTTCCTTGAAGACTTGCAGCTCCCAGATTTTGATGAGTGGTCTTGTAATTACACTGACAGTAACATTATTAACAACGGCAGCAACAACAACAGCAATAACAACAACAGTTATATGGAACTGTGGGATGATGACTTCTTTGCAAGCTGGGATTTGCTCATCAATGACCATAATGATGGTAACACAAAGCCAGAGTTTGATCCTCCCATCAATAATCAGTATCCAAGAATCATAGACGATTCCGAGTCTTGGGCATTTGGGCTGTTTTGA 1005 0.4398 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSDYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSTEQQQQQPQTQQKHHQQQLSSLPEKLETPSFDSSTNNITELTAAAVPATTEEAGKNYMTPTPPTLIEDPLLPMNGFCTDEVPIIQPHEILVPSSSTSTATSSSSSSSPSCNSSNSNFLEDLQLPDFDEWSCNYTDSNIINNGSNNNSNNNNSYMELWDDDFFASWDLLINDHNDGNTKPEFDPPINNQYPRIIDDSESWAFGLF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0543 334 CDD SANT 16 61 IPR001005 -
Bisa09g0543 334 MobiDBLite consensus disorder prediction 128 165 - -
Bisa09g0543 334 SMART sant 66 114 IPR001005 -
Bisa09g0543 334 SMART sant 13 63 IPR001005 -
Bisa09g0543 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa09g0543 334 Gene3D - 11 67 - -
Bisa09g0543 334 PANTHER F14D16.11-RELATED 1 274 - -
Bisa09g0543 334 MobiDBLite consensus disorder prediction 222 244 - -
Bisa09g0543 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa09g0543 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa09g0543 334 FunFam MYB transcription factor 11 67 - -
Bisa09g0543 334 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa09g0543 334 FunFam Myb transcription factor 71 133 - -
Bisa09g0543 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa09g0543 334 Pfam Myb-like DNA-binding domain 74 111 IPR001005 -
Bisa09g0543 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa09g0543 334 CDD SANT 74 112 IPR001005 -
Bisa09g0543 334 Gene3D - 70 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0543 Bisa-ChrBisa09 7991838 7993467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0543 1 334 MYB Transcription Factor Family AT5G16600 48.199 4.18e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g0543 Myb_DNA-binding 3.4e-12 CL0123