Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0532 ATGTCCGGGAAGAAGGTGGTGCGGGAGGTGGTGGAGGAGGGGAAAGAGAAGCAAATGTCGTCGTCACCGTCGCCGGCGTCGTCTTCGGACGGGAGAGAGTATGAAGTTCAGGACCTGAGAGACAGGTTGAATTCGTCCCGAGGAAGCCGATTCAATTTGATAGAGAACGAGTTCGGACTCGGAACTCGGAGGAGGTTCAGTCGCCAAGTTCTCGATGGCATCCGAGGCTTCTCCGAACATTTTGATTTTATTATTCGTCCAGATAACAGGTGGTATCGAGCATGGAAAAAGTTCATATTGCTGTGGGCAGTGTACTCGTCCTTTTTCACCCCATTGGAGTTTGGATTTTTTCGTGGGCTGCCTGAGAATCTCTTTATCTTGGACATAGTTGGACAACTAGCTTTTCTTGTAGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCGGACCTATCGGATGATTCTCAAGCGAACCCCTATAGCTCTGCGGTATCTAAGATCTAGCTTTATCTTTGACCTTCTTGGATGTATGCCCTGGGACATCCTCTACAAGGCTTGTGGAAGAAGAGAGGAAGTAAGGTATCTTCTGTGGATCAGATTATATCGGGTGCGTAAAGTCACTCATTTTTTCCAGAATTTGGAGAAGGATATACGTATCAATTATATGTTTACTAGGATTGTGAAACTTCTAGTAGTTGAACTCTACTGCACCCATACGGCAGCCTGCATCTTCTACTATTTGGCCACCACGCTACCTCCGTCCCAAGAGGAGTACACATGGATAGGAAGTCTACAGCTGGGAAACTACAGTTATTCACATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACGTCTTTATATTTTGCTATTGTTACAATGGCTACTGTCGGGTATGGAGATATACATGCAGTCAATATGAGAGAGATGATATTCATAATGATATATGTTTCATTTGACATGGTTCTTGGTGCTTATTTGATTGGTAACATGACGGCTTTGATAGTTAAAGGATCAAAGACTGAAAAATTTAGGGATAGAATGACAGATATTATGAAATATATGAACAGAAACAGACTTGGAAGGGACATCCGAGAACAAATAAAAGGCCATTTGCGCTTACGGTATGAGAGTAGTTACACTGAGCCTGCTCTCCTTCAGGACCTCCCCATTTCTATACGTTCTAAGATATCCCAAGAATTATATTTGCCATACATTGAAAAGGTTTCTCTCTTTAAGAACTGCTCTTCAGAATTCATCAATCAGATTGTTATTAGGCTCCATGAGGAATTCTTTCTGCCAGGAGAAGTGATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCACGGTGTGCTGGAGGAAGTAGGCACAGCTGAAGAGACTGTTTCGCTTCTACAACCTAACAGTTCATTTGGGGAAATATCTATACTATGTAATATTGCTCAGCCATATACTGTTCGGGTTTGTGAACTATGTAGGCTTCTGCGGCTCGAGAAACAGTCGTTTACAGATATCCTTGATATATACTTCTATGACGGGAGAAAAGTTTTAAACAACCTTCTAGAGGGAAAAGTAGCTATTCTAGGTAAGCAATTGGAGTCAGACATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAATAACGCAGCTTTTAATGGGGATTTGTATCAGCTCAAAGGTTTGGTTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGCCGGTCACCGTTGCATCTTGCAGCATCTAGAGGATATGAAGATATTGTACTTTTCCTTATTCAGGAACGTGTAAACGTTGATATTAGAGATAACTTTGGAAATACACCCTTACTTGAAGCTGTAAAGAATGGACATGATCGAGTAGCTTCCTTACTTGTTGGAGAAGGGGCTTCTATGAAGATAGAGAATGCCGGTAGTTTTCTTTGTAATGCTGTTGCAAGGGGAGATTCTGATTATCTCAAAAGGCTATTATCTTATGGTATGGATCCTAATTTGAAAGATTATGATTACCGAAGCCCTCTTCATGTTGCTGCTGCTGAGGGTTTATTCTTCATGGCAAAGATACTATTAGAAGCTGGAGCTAGTGTTTTTACCAGAGACCGATGGGGTAATACCCCACTTGATGAAGCTCTGATGTGTGGAAATAAGAATCTGATCAAGCTACTAGAAGATGTCAAGTCTGCTCAGTTGTCAGAATTCTCACATCCTTCCTCAGAATTTACAGATAGATATCGCCCACAAAAATGCACGGTCTTTCCTTTCCACCCGTGGGATCCAAAAGAACAGAGACGACACGGAATTGTAGTATGGGTTCCACACACCATTGAAGAGCTTATCAAGGCAGCAGCAGAGCAGCTAGAAATTTCTGGTGACTGTTGTATTTTATCAGAAGATGCCGGTAAAATTACTGATATTAACATGATTAAGGATGGTCAAAAGCTGTATTTAGTCCTGAAACGCAATAAATATGTATAG 2514 0.4149 MSGKKVVREVVEEGKEKQMSSSPSPASSSDGREYEVQDLRDRLNSSRGSRFNLIENEFGLGTRRRFSRQVLDGIRGFSEHFDFIIRPDNRWYRAWKKFILLWAVYSSFFTPLEFGFFRGLPENLFILDIVGQLAFLVDIVLQFFVAYRDSRTYRMILKRTPIALRYLRSSFIFDLLGCMPWDILYKACGRREEVRYLLWIRLYRVRKVTHFFQNLEKDIRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPPSQEEYTWIGSLQLGNYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDIMKYMNRNRLGRDIREQIKGHLRLRYESSYTEPALLQDLPISIRSKISQELYLPYIEKVSLFKNCSSEFINQIVIRLHEEFFLPGEVILEQGNVVDQLYFVCHGVLEEVGTAEETVSLLQPNSSFGEISILCNIAQPYTVRVCELCRLLRLEKQSFTDILDIYFYDGRKVLNNLLEGKVAILGKQLESDITFHIGKQEAELALKVNNAAFNGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGYEDIVLFLIQERVNVDIRDNFGNTPLLEAVKNGHDRVASLLVGEGASMKIENAGSFLCNAVARGDSDYLKRLLSYGMDPNLKDYDYRSPLHVAAAEGLFFMAKILLEAGASVFTRDRWGNTPLDEALMCGNKNLIKLLEDVKSAQLSEFSHPSSEFTDRYRPQKCTVFPFHPWDPKEQRRHGIVVWVPHTIEELIKAAAEQLEISGDCCILSEDAGKITDINMIKDGQKLYLVLKRNKYV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat region circular profile. 618 649 - -
Bisa09g0532 837 Pfam Ion transport protein 93 338 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa09g0532 837 SMART cnmp_10 413 527 IPR000595 -
Bisa09g0532 837 MobiDBLite consensus disorder prediction 17 31 - -
Bisa09g0532 837 Pfam Cyclic nucleotide-binding domain 433 513 IPR000595 -
Bisa09g0532 837 FunFam Gated outwardly-rectifying K+ channel 624 751 - -
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat profile. 682 714 IPR002110 GO:0005515
Bisa09g0532 837 FunFam Potassium channel SKOR 93 338 - -
Bisa09g0532 837 Gene3D - 542 650 IPR036770 -
Bisa09g0532 837 ProSiteProfiles KHA domain profile. 761 837 IPR021789 -
Bisa09g0532 837 Gene3D - 651 743 IPR036770 -
Bisa09g0532 837 Gene3D Jelly Rolls 397 530 IPR014710 -
Bisa09g0532 837 Pfam Ankyrin repeats (many copies) 683 735 IPR002110 GO:0005515
Bisa09g0532 837 Gene3D - 95 339 - -
Bisa09g0532 837 SMART ANK_2a 585 614 IPR002110 GO:0005515
Bisa09g0532 837 SMART ANK_2a 715 745 IPR002110 GO:0005515
Bisa09g0532 837 SMART ANK_2a 618 647 IPR002110 GO:0005515
Bisa09g0532 837 SMART ANK_2a 649 678 IPR002110 GO:0005515
Bisa09g0532 837 SMART ANK_2a 682 711 IPR002110 GO:0005515
Bisa09g0532 837 Gene3D Helix hairpin bin 340 396 - -
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat profile. 618 650 IPR002110 GO:0005515
Bisa09g0532 837 SUPERFAMILY Ankyrin repeat 558 737 IPR036770 -
Bisa09g0532 837 ProSiteProfiles cAMP/cGMP binding motif profile. 413 529 IPR000595 -
Bisa09g0532 837 MobiDBLite consensus disorder prediction 11 33 - -
Bisa09g0532 837 FunFam Potassium channel KAT2 401 533 - -
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Bisa09g0532 837 PANTHER POTASSIUM CHANNEL AKT1 68 831 IPR045319 GO:0005249|GO:0006813
Bisa09g0532 837 SUPERFAMILY cAMP-binding domain-like 341 527 IPR018490 -
Bisa09g0532 837 Pfam Ankyrin repeats (3 copies) 559 647 IPR002110 GO:0005515
Bisa09g0532 837 CDD CAP_ED 413 523 IPR000595 -
Bisa09g0532 837 Pfam KHA, dimerisation domain of potassium ion channel 761 829 IPR021789 -
Bisa09g0532 837 PRINTS Ankyrin repeat signature 586 601 IPR002110 GO:0005515
Bisa09g0532 837 PRINTS Ankyrin repeat signature 698 712 IPR002110 GO:0005515
Bisa09g0532 837 SUPERFAMILY Voltage-gated potassium channels 87 338 - -
Bisa09g0532 837 PRINTS EAG/ELK/ERG potassium channel family signature 329 338 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa09g0532 837 PRINTS EAG/ELK/ERG potassium channel family signature 237 247 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa09g0532 837 PRINTS EAG/ELK/ERG potassium channel family signature 128 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa09g0532 837 PRINTS EAG/ELK/ERG potassium channel family signature 285 302 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Bisa09g0532 837 ProSiteProfiles Ankyrin repeat region circular profile. 682 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0532 Bisa-ChrBisa09 7802530 7815895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0532 656 735 Ion Channels AT5G37500 34.314 3.48e-08 55.5