Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0530 ATGGAACCATGGAGACTGCTGAACTTACAGTGGAGTGAACGACTTACGACCAATAATACACTTAGCGTGCAATGTCATGTGTGGCCAGACAATTACTCTAGACTCTTCATATGTGGGGATGAGTCAGCATCTGGTACAATTGTACTTTATTTCAGCTTCAGCTTGAGGAAGAAGCGAAGTCTTGGGGAATTGGGGCGTCCTCGATCTCAAAGCCAAGCTTCAAGTTCAACCATGTCTTTCTCTCTCGTCGAATCATGTAGAAAGAGAAAAAGATGGCCCAAGGTTTTCAGGTTTCACTCTTTCGCCGACCCTGGGAGTCCTATAAACCCTACCGGACCTTTTCGAGATAACGTTCGTCTCTTTCTTCAAGAATGCGGAGAGCTTGAAGATTACCACATCCAGGGCATGCCCTTGTGGTGCACTCTTCTTATCCACGAGAAATCCAACTTTATGACGCCTCTCTATACTGTTGAAGAGAACGTCTACCACTCTACGCATCCGTTCTGCGATCATTGCCGATGTGCAGGCTGGAGCGGGCATTTCGTATCCAAGAGAAGGTACCATTTCATAATCCCCATAGATAATAAACCGTTGGATGAAGGTTTTCTTGATAATCAGAGCCATCTCTTGCATGGGATGATTCATTGTAATGGGTATGGGCATTTGCTCTGTATCAATGGCATTGAAGGGGGTTCCAAATTGCTCAGTGGCAGAGAAATCATGGATCTCTGGGACAGAATATGCACAAATCTTCGAACAAGAAAAATCGCAGTTGAAGATGCATCAAAGAAGCGATCGATGGATCTTCGCTTACTTCACGGAGTTGCTTACGGGCATTCTTGGTTCGGTAGGTGGGGCTACAGATTTTGCCGCGGAAGCTTTGGAGTGACAGAGCACAATTACAGTGCAGCAATCGAATTGCTGAGTTCGTTGGAGCTAGATGAGGTGCTTCAATATTTTAGTAAGACAATTTCTCATAAAGAAATCAAACAAATAATTCGCTACTACAGAGATATGAGTGAAACCCAGTTGATCACAGTCAAGGATCTTCTCAGGTTTATGCTTACCGTCAAGTCTCGTGCTCCTCCACCAAAGAAATTATTAGTCACTTTCAATGCTCCTCCTTCTTCTTCAGCCTTCACCTCAAGAAACTCAACCAGAAATGCTATCTCAAGCAAACCAAACCCGATGAAGGAAAAATCAGTCAGGTATAAGAAGTTCAGTTCTGCAGTGGCCAATATGGACAGCAGGTGGCCTGCAAGGAGACTAGAATACGCAGCCCAAGTGATAGTAGATGCATTGAAAGAGAACAAAGCAAATACTTCAGGTTCTGGTGGGATGACTAGGCAAGATGTGAGAGATGCAGCTAGGCTCCACATTGGTGACACAGGATTGCTGGATTATGTGTTGAAATCACTGAACAATGTGATTGTTGGAAACTATGTTGTCCGTCGTATGGTAAACCCAACAACTCGAATTCTAGAATACAACATTCATGAGCTGGGAAATGGGTTTAAAGCCCCTGAACCAGAGCCTGAGATGAAGGTCCTAGTAGAGCATGTAGCACAGTCGGATCAAACGCCTGGAATTGATGTTTACAGTGATGTAGTCTTTCTGTACAAGAATGTCCTATTGGGTTACCCAGATTCAGAACCAGTGGACTTGGCAGTTCAGACAATTCTAGACAGTAGGCATTTTGTGAAGGAATGGACATTAATTGATGAAATAGAGCAAGTTTTGACATTCATGTGTCGCTTGAAACCCAACATTGTTGATATTAAATCAGAGTTGAACAAGGAAGCAGCCCCAGGTGAGATTGTGATGGTTCCACTGCATGCAACAGTTGGAGACTTGAAGCAAGCAGCAGAGACGGCTCTGAGGGACACTTACTGTATTGCGGAGAGAGTTATGGTGACGGAGATTGCAGAGTTGGTGGGAGTGAGTGATGAGGAAGTGCTTTTTGGAGTGGTTCAGTCAGGTGTGGATCTTTGCGTGAGGGGAATTGGTGTAGATTTGGATACTCCATTGAAATACCAGGGAGGAGCTGATAATTGGAAGGTGAGATGTGAATGTGGGGCTCAGGATGACGATGGCGAGAGAATGGTGGCATGTGACATTTGTGAGGTGTGGCAACACACACGATGTTGTGGGATAGATGACTCAGAGACAGTTCCACCACTGTTTGTGTGCTCTGGGTGCTGCGATTCACTTGTACCCCCAAGGATTGAATCTGCCTTTAGCAACAACAGCATGGATTGTGCTGATGATTTTCTCATTTCCCCAGAAACTAATTCCTTGCTGGAATTTGGGTATGGGTACTGA 2322 0.4479 MEPWRLLNLQWSERLTTNNTLSVQCHVWPDNYSRLFICGDESASGTIVLYFSFSLRKKRSLGELGRPRSQSQASSSTMSFSLVESCRKRKRWPKVFRFHSFADPGSPINPTGPFRDNVRLFLQECGELEDYHIQGMPLWCTLLIHEKSNFMTPLYTVEENVYHSTHPFCDHCRCAGWSGHFVSKRRYHFIIPIDNKPLDEGFLDNQSHLLHGMIHCNGYGHLLCINGIEGGSKLLSGREIMDLWDRICTNLRTRKIAVEDASKKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTEHNYSAAIELLSSLELDEVLQYFSKTISHKEIKQIIRYYRDMSETQLITVKDLLRFMLTVKSRAPPPKKLLVTFNAPPSSSAFTSRNSTRNAISSKPNPMKEKSVRYKKFSSAVANMDSRWPARRLEYAAQVIVDALKENKANTSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPTTRILEYNIHELGNGFKAPEPEPEMKVLVEHVAQSDQTPGIDVYSDVVFLYKNVLLGYPDSEPVDLAVQTILDSRHFVKEWTLIDEIEQVLTFMCRLKPNIVDIKSELNKEAAPGEIVMVPLHATVGDLKQAAETALRDTYCIAERVMVTEIAELVGVSDEEVLFGVVQSGVDLCVRGIGVDLDTPLKYQGGADNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRIESAFSNNSMDCADDFLISPETNSLLEFGYGY 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0530 773 SMART PHD_3 688 734 IPR001965 -
Bisa09g0530 773 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 89 742 - -
Bisa09g0530 773 ProSitePatterns Zinc finger PHD-type signature. 689 733 IPR019786 -
Bisa09g0530 773 SUPERFAMILY FYVE/PHD zinc finger 681 739 IPR011011 -
Bisa09g0530 773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 676 737 IPR013083 -
Bisa09g0530 773 CDD PHD_MMD1_like 689 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0530 Bisa-ChrBisa09 7797836 7801601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0530 87 739 PHD Transcription Factor Family AT5G22260 33.665 9.01e-119 371