Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0525 ATGGAAGCAAACTTTGATCTGGAAGTGGAGGCCTCTGCAGAAAATGAATTTGAAGTTAGCAGCCAGGTTGCTTCCAATATATCTACGCAAGAGACCTTTGCAGGTCCTAGTAGTGGTCAAAGCCTCACTAACTCTTCCAACCTCGCAAATCCAACAGGGATGATTCATGGAATTTCAGATCCCATTTCACTTGACTTAACTCTCAACTTTAATAATGAGTTAAATGTAGGGGCAAGAGATTCCATAGGTCTCTCATTCTCAAGCACAAGTGAGAGCAGCAACGAACCTGCCTCTCAAACTACAGCAACCATCCAAAGAGTTTTCTCCTGCAATTACTGTCAGCGCAAGTTCTTCAGCTCGCAGGCTCTTGGCGGCCACCAAAACGCACACAAGAGAGAAAGATCACTGGCAAAGCAGGCTATGAGAATGGGATTTTTCTCAGATAGGTATGCAAGTCTGGCATCTCTCCCTCTTCATGGTTCTTTAAGGTCCTTAGGGATAAAAGCACACTCTTCACAGCATTATGGTTTTTCACCAACAATGAGGCCTCATGAGATGAAAAGCAATGCAAGGTTTGAGCAAGGGTGTTTTGGTCAGCCTATATTCTTGGAGGATGATGAGACACAACTTTTGTGGCCTGGTAGTTTCCGTGAGGTTGCAGAGGTAGGTGACGCTCATAAGAATTTTATACTGACTGAAAGTTCTAATTTGAGTTTTAGGGAGATGAATCCAACAGTAGACATAGAGAACTCCACACCAGATTTGTCGTTAAAACTTTGA 780 0.4333 MEANFDLEVEASAENEFEVSSQVASNISTQETFAGPSSGQSLTNSSNLANPTGMIHGISDPISLDLTLNFNNELNVGARDSIGLSFSSTSESSNEPASQTTATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERSLAKQAMRMGFFSDRYASLASLPLHGSLRSLGIKAHSSQHYGFSPTMRPHEMKSNARFEQGCFGQPIFLEDDETQLLWPGSFREVAEVGDAHKNFILTESSNLSFREMNPTVDIENSTPDLSLKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0525 259 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 57 181 IPR044246 GO:0009788
Bisa09g0525 259 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Bisa09g0525 259 Gene3D Classic Zinc Finger 85 152 - -
Bisa09g0525 259 SUPERFAMILY beta-beta-alpha zinc fingers 105 136 IPR036236 -
Bisa09g0525 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0525 Bisa-ChrBisa09 7725297 7726076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0525 105 259 C2H2 Transcription Factor Family AT1G66140 47.849 1.27e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa09g0525 None None None