Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0513 ATGGTTCTGTCAAAGACAGCCTCCCAGACGGACATGTCGGTGCACTCGACGTTCGCGTCGCGGTACGTGAGAGCACCGCTGCCGCGGTTCAGGATGGCGGAGCAGTCGATACCGAAGGAGGCGGCGTACCAGATCATCAACGACGAGCTCATGCTGGACGGCAACCCCAGGCTGAACCTCGCCTCCTTTGTCACCACCTGGATGGAGCCTGAGTGCGACAAGCTCATCATGGCCTCCATCAACAAGAACTACGTCGACATGGACGAGTACCCTGTCACCACTGAACTCCAGAATCGGTGTGTGAACATGATAGCTCATCTCTTCAATGCACCACTTGGAGAGTCAGAGCCCGCCGTTGGCGTTGGCACCGTTGGCTCATCGGAGGCCATCATGTTGGCTGGCTTGGCCTTCAAAAGGAAGTGGCAGAACAAAATGAAAGCCATGGGAAAGCCTATTGACAAACCCAACATCGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTCGAGGTGGAACTGAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTAATGGACCCTGAAAAGGCAGTGGAAATGGTGGACGAGAACACTATTTGCGTTGCGGCTATCCTTGGTTCCACGCTCAACGGAGAATTCGAAGATGTCAAACGCTTAAACGATCTCCTAACTGAGAAGAATAGCCAAACAGGATGGGACACTCCGATTCACGTGGATGCAGCGAGTGGAGGGTTCATCGCACCATTCCTGTATCCAGATCTGGAGTGGGACTTCCGATTGCCATTGGTGAAGAGCATCAACGTGAGTGGCCACAAGTATGGTCTAGTGTATGCGGGGATCGGATGGGTGATTTGGAGAAGCAAGGAGGATTTGCCCGAGGAACTCATCTTCCACATTAACTATCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCCAGCCAAATTATTGCTCAGTACTACCAGCTGATTCGCTTGGGCTATGAGGGATACAGGAATGTGATGGAAAACTGCAGAGACAACATGTTAGTTCTGAAAGAGGAGCTGGAGAAGACAGGGCGCTTTAACATCATATCCAAAGACGATGGGGTGCCATTGGTGGCCTTCTCCCTGAAGGACCACTCACACTTCAACGAATTCCAGATCTCAGACTTCCTCAAGCGCTATGGCTGGATCGTCCCTGCCTACTCCATGCCTCCAGATGCTCAGGAGGTCACGGTCCTCCGCGTCGTCATCAGGGAGGACTTCTCTCGAACATTCGCTGAGCGTCTCGTCATCGACATCCAGAAAGTGTTGCAAGAGCTCGACCTGCTTCCGGCCAGGACCGCCACCGTCGCCGCCGAAAAGGCAGAAGACGGCCATGTCCATGTGATTCCCAAGAAGAGCGATCTCGAGACCCAAAGGGAGATCACCACCGTTTGGAGGAAGTTCGTGGCGGAGAGCAAGAAGATAAAAGGCGAGAAGATGAACGGTGTTTGCTAG 1509 0.5282 MVLSKTASQTDMSVHSTFASRYVRAPLPRFRMAEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEPAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAMGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLTEKNSQTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCRDNMLVLKEELEKTGRFNIISKDDGVPLVAFSLKDHSHFNEFQISDFLKRYGWIVPAYSMPPDAQEVTVLRVVIREDFSRTFAERLVIDIQKVLQELDLLPARTATVAAEKAEDGHVHVIPKKSDLETQREITTVWRKFVAESKKIKGEKMNGVC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0513 502 PANTHER GLUTAMATE DECARBOXYLASE 1 492 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bisa09g0513 502 Gene3D - 1 65 - -
Bisa09g0513 502 Pfam Pyridoxal-dependent decarboxylase conserved domain 37 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bisa09g0513 502 FunFam Glutamate decarboxylase 1 65 - -
Bisa09g0513 502 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bisa09g0513 502 CDD DOPA_deC_like 59 439 - -
Bisa09g0513 502 NCBIfam glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bisa09g0513 502 Gene3D - 361 448 - -
Bisa09g0513 502 Gene3D - 66 360 IPR015421 GO:0003824
Bisa09g0513 502 FunFam Glutamate decarboxylase 361 448 - -
Bisa09g0513 502 FunFam Glutamate decarboxylase 66 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0513 Bisa-ChrBisa09 7543542 7547304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0513 1 495 Calmodulin-binding Proteins AT5G17330 82.800 0.0 867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0513 09 7543542 7547304 Bisa09g0513 09 7543542 7547304 ECH