Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0503 ATGGAGGAAGAAGAAAAACAACGAAGCCTAGACAGCTTCTTACGATGGGCGGCAGAGCTTGGAATATCAGATGCAGCAATCACCAGTCAACCTCAACATTCTCTTTCCTGTTTGGGTTATTCTCTCTGTGTCTCCCATTTTCCTCATTCTGGCGGTAGAGGTTTGGGTGCTGTGCGAGACCTTAGGAAGGGAGAATTAGTCCTCAGAGTTCCCAAATCTGCCTTAATGACAGCAGGAAATGTCATGAAAGAAGATAAGAAGCTCTCCCTTGCTGTTAATAAGCACCCTTATCTCTCCTCTGCGCAGATATTGATCGTTTGCTTATTGTATGAAATTGGCAGAGGAAAGTCTTCAAAGTGGCATCCTTACCTCATGCATTTGCCACATACATATGACATACTAGCCACATTTGGTGAATTTGAGAAACAAGCTCTTCAAGTGGATGAGGCTCGGTGGGTCACCGAAAAGGCTGTATTAAAGGCCAAATCAGAGTGGCAAGAAGCCAATGCTTTGATGGAAGAACTCAAGCTTAAGTCCCAACTTTTAACATTTAAGGCATGGCTTTGGGCTACTGCAACGATATCCTCCCGGACACTGCATGTACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCGCCTGGAAAGGAGCCATGTGGTCCTAAAGATGAAGAAATTCTATTATCCAACTCTTCCTTCCAAGTCACTTGTGTGTCAAATGTAGACAAGGCTGCAATGGTGGTTGCTGAGCACCTTGATTCTCATTTCCAGAGATTAACAGATGGTGGATTTGAGGAAGATGTTAATTCATATTGCATTTATGCTAGGGAGAATTACAAGCAAGGAGAGCAGGTTTTATTATGCTATGGAACATACACAAATCTAGAGCTTCTTGAACACTATGGGTTTCTTTTACAAGAAAATCCAAATGACAACATTTTTATTCCTCTAGAATCTGCTGTATATTCTTCTAGTTCATGGCCTAGAGAGTCACTCTATATTGATCATAATGGGAAGCCTTCCTTTGCACTACTGTCTGCATTGCGGTTGTGGGCAACCCCTAAAAACAAGAGGAGGTCTGTTGGACATCTTGCATATTCTGGTACTCAACTGTCTTCAGACAATGAAATTTTTATCATGAAATGGCTGTCAGAGACTTGTAATGCTGCCTTGAAGAGTTTGCCAACATCTATTGATGAAGACACATTACTCCTTAATGCAATGGATAATAGTCAAGATTTGTGTACTTTCATGGAGGTCACAAAACTATTGTCTTCGAGGGATGAGATTTTTAGCTTCTTAGAATCTACTCATCTTCAGGATGGACATAATTTAACTGATATACTTGTATCTGGGAAAGCTAGAAGGACCGTGGACAGGTGGAAATTGGCTGTTCAATGGAGGCTCAGGTATAAAAAAGTCCTAGTGAACTGTATCTCTTATTGCAATGAAATACTTGATTCTCTCTTGACATAA 1497 0.4128 MEEEEKQRSLDSFLRWAAELGISDAAITSQPQHSLSCLGYSLCVSHFPHSGGRGLGAVRDLRKGELVLRVPKSALMTAGNVMKEDKKLSLAVNKHPYLSSAQILIVCLLYEIGRGKSSKWHPYLMHLPHTYDILATFGEFEKQALQVDEARWVTEKAVLKAKSEWQEANALMEELKLKSQLLTFKAWLWATATISSRTLHVPWDEAGCLCPVGDLFNYDAPGKEPCGPKDEEILLSNSSFQVTCVSNVDKAAMVVAEHLDSHFQRLTDGGFEEDVNSYCIYARENYKQGEQVLLCYGTYTNLELLEHYGFLLQENPNDNIFIPLESAVYSSSSWPRESLYIDHNGKPSFALLSALRLWATPKNKRRSVGHLAYSGTQLSSDNEIFIMKWLSETCNAALKSLPTSIDEDTLLLNAMDNSQDLCTFMEVTKLLSSRDEIFSFLESTHLQDGHNLTDILVSGKARRTVDRWKLAVQWRLRYKKVLVNCISYCNEILDSLLT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0503 498 Gene3D - 324 497 IPR036464 -
Bisa09g0503 498 CDD SET_LSMT 41 311 - -
Bisa09g0503 498 FunFam Protein SET DOMAIN GROUP 40 10 311 - -
Bisa09g0503 498 Pfam Rubisco LSMT substrate-binding 345 482 IPR015353 -
Bisa09g0503 498 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 307 487 IPR036464 -
Bisa09g0503 498 Gene3D set domain protein methyltransferase, domain 1 6 311 - -
Bisa09g0503 498 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 8 428 - -
Bisa09g0503 498 Pfam SET domain 52 297 IPR001214 GO:0005515
Bisa09g0503 498 ProSiteProfiles SET domain profile. 40 297 IPR001214 GO:0005515
Bisa09g0503 498 SUPERFAMILY SET domain 8 315 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0503 Bisa-ChrBisa09 7409870 7413112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0503 52 325 NAC Transcription Factor Family AT3G56570 21.250 5.47e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa09g0503 SET 1.8e-10 No_clan