Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa09g0482 | ATGGCAGCCGCGGACCTCATTGAGCCAGTCAACGACGTCAAGCTCTTCAATCGTTGGACCTTCGAGGATGTTCAGGTGAATGACATATCCCTGGCTGATTACATTGGTGTGGCTCCTGCAAAGCATGCAACGTATGTGCCCCACACTGCTGGGAGGTACTCAGTCAAGCGATTCAGGAAAGCTCAATGCCCTATAGTGGAGAGGCTCACCAACTCTCTTATGATGCATGGACGAAATAACGGGAAAAAGCTTATGGCAGTAAGGATCATAAAGCATGCTATGGAAATTATCCACTTGCTTACCGATCAGAACCCTATCCAAGTTATTGTTGATGCTGTGATCAACAGTGGGCCAAGGGAAGATGCTACTCGAATTGGGTCTGCTGGTGTTGTCAGGCGTCAGGCAGTGGATATTTCTCCCCTGCGTCGTGTTAATCAGGCAATCTACCTCCTTACCACAGGTGCTCGTGAGGCTGCGTTCAGGAACATTAAGACAATTGCGGAATGCTTGGCTGATGAACTTATCAATGCTGCAAAGGGGTCATCAAACAGCTATGCCATTAAGAAGAAGGACGAGGTTGAGAGAGTTGCCAAGGCAAACCGTTGA | 606 | 0.4851 | MAAADLIEPVNDVKLFNRWTFEDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa09g0482 | 201 | CDD | uS7_Eukaryote | 14 | 201 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 | |
| Bisa09g0482 | 201 | PIRSF | RPS7p_RPS7a_RPS5e_RPS7o | 1 | 201 | IPR000235 | GO:0006412 | |
| Bisa09g0482 | 201 | NCBIfam | 30S ribosomal protein S7 | 13 | 201 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 | |
| Bisa09g0482 | 201 | Gene3D | Ribosomal protein S7 domain | 1 | 201 | IPR036823 | - | |
| Bisa09g0482 | 201 | PANTHER | RIBOSOMAL PROTEIN S7 | 3 | 201 | IPR000235 | GO:0006412 | |
| Bisa09g0482 | 201 | Pfam | Ribosomal protein S7p/S5e | 55 | 201 | IPR023798 | - | |
| Bisa09g0482 | 201 | SUPERFAMILY | Ribosomal protein S7 | 14 | 201 | IPR036823 | - | |
| Bisa09g0482 | 201 | FunFam | 40S ribosomal protein S5 | 1 | 201 | - | - | |
| Bisa09g0482 | 201 | ProSitePatterns | Ribosomal protein S7 signature. | 67 | 93 | IPR020606 | GO:0003723|GO:0003735|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa09g0482 | Bisa-ChrBisa09 | 7037229 | 7039267 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa09g0482 | 11 | 201 | Cytoplasmic Ribosomal Protein Gene Family | AT2G37270 | 91.099 | 6.63e-134 | 372 |