Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0465 ATGGCCATCGTCATCGACGACAACAATTTCTGCTGCACGTGTGACATGACCAGAAATTTACGATTTCAAATTTCAGTATTTCTAGATGTGCTTACCTCTTCTTCTTGTTGTTCAGTTTTAGACCATTTGGTTTCATTTGTTATACAGCTATTGGCTAGCTTTATTTCGTCAAAACGCTCTGGTTTAAAGTCTTTATCAGGGAAATTAAAGTACCATGCTCGTTTCGTGAGAGCGCAGAAATCTGTCACTGACCCCACTGAAGTTGAAGCATTGAAAGCCATCAAGAGAAGTTTGACCGATCCTAAAGGAAATCTGAGTAACTGGAATAATGGAGATCCATGTACATCTAACTGGACAGGGGTCTTGTGCAATAGAACATTGGCTGATGGCTATCTACATGTTCAAGAATTGCGACTGCTGAATTTGAACTTGTCTGGAACTTTGGCACCAGAGATTGGCCGTTTATTTCAATTGCAAATATTGAACTTTATGTGGAACAATATAAGTGGGAGTATACCGAAGGAAATTGGCAACATCAAAAGTTTGAAACTACTGCTACTGAATGGAAATCAATTAACAGGTCATCTGCCAGAGGAGCTTGGTTATCTTCCAGTCCTGGACAGAGTACAAATTGATCAGAACCAAATAACAGGACCTGTACCTACATCATTTGCAAACTTGAATATGGCAAAGCACTTCCTTCTTGACGATAACAACTTATCAGGATATCTTCCCCCAGAACTCTACAAGATGCCAAACATAAAGATAATGCTTGAGGGAAATCCTCTTTGTTCTAATGATACGCTAGTTCAATTCTGTGGTTTTGAAAGTGCCAATGATACTAAAAACTTGAGTCCACCAAACTCCAATGTTAGCTGTCCCAGTCAAGGATGCCCCCCTCCTTATGAATATTCTAAAACATCTCCCGTGAATTGCTCCTGCGCAGCACCATTGCTCATTGATTATCGGTTGAAAAGTCCTGGATTTTCAGATTTTCCTCCATACCTGAATGCATTTGAGAACGACCTGGCTTCTGAACTTAATTTATATATTTATCAGCTTGAAATTGATACCTATAAATGGCAAGAAGGACCTCGACTGCTCATGTACTTGAAGCTTTTTCCTGTAAACGCTTATACTTTCAATAGAAGTGAGGTCCTGCGTATTTATAGCTTGTTCACAACATGGGCTATTTCTAATGATGATATCTTTGGACCTTATGAACTGCTCAACTTCACTTTGCTGGATCCTTACAAAGATGAGATTATCACCTCTCCAAGTTCAGGGATAAGCAAGGGGACACTGGTGGGCGTAACCTTAGCAGCAATTGCCTGTGCAGTTATTTTATCTGCAATTGTTACTCTTCTCATATTGAGAGTGTGCAAAAGAGATTCGCATGCAATTTCAAAACGGCATCATTCATCTAAAATCTCAATAAAAATTGATGGTGTGAGGAGCTTCACTTATGAAGAAATGGCCTTGGCTACGAAAAACTTTAGCGAATCCACTCAAGCTGGCCAAGGAGGGTATGGGAAAGTTTATAAAGGTATTCTTGCCGACGGCACTGTTGTTGCCATAAAACGTGCGCAGGAAGGATCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATACAATTACTATCAAGGTTACATCATCGGAACCTTGTGTCTTTGATTGGATACTGTGATGAAGAAAGTGAACAGATGCTGGTTTATGAATTTATGCCTAATGGAACGCTGAGGGATCATCTTTCTGCTAACTCAAAAGAACCTTTGAGTTTTGATATGAGATTGAGGATTGCACTAGGGTCAGCTAAGGGTATCCTATATCTACATACGGAAGCTGATCCTCCAATATTCCACCGAGATATCAAGGCCAGCAACATATTATTGGACTCTAGGTTCTCAGCCAAAGTTGCTGATTTTGGACTTTCACGGCTTGCGCCAGTTCCAGATATTGAAGGAATTGTGCCTGCTCATGTATCTACTGTGGTAAAGGGAACACCGGGTTACCTTGATCCTGAGTACTTCTTAACTCGTAAGTTGACTGATAAGAGTGACGTTTATAGTCTTGGTATTGTATTCTTGGAACTTTTGACAGGGAGGCCGCCGATCGCACATGGCAAAAATATTGTTAGAGAGGTTAATGATGCATCCCGTTCTGGTGAGATATTCTCAGTTATCGATGGACAAATGGGGTCCTATCCTTCTAAGTACGTGGAGAAGTTTTTGAGTCTGGCCCTAAAGTGTTGCCAAGATGAGCCAGATGCAAGGCCTAAAATGGCAGAAGTGGTTCGAGAGCTGGAAAACATATGGTCTATAATGCCGGAGTTCAATGCTAAGATACCTGAATATACATCCAGTGGTTCTGGAAAAATATTCAGTTCACCTTCTTCCTCCTTTACTAGTAAGACTCCTTTTATATCACTAGATGTGTCTGGCAGTGGTCTTGTTAGTGGAGGAGAACCAACCATTAACCCAAGATAA 2487 0.4081 MAIVIDDNNFCCTCDMTRNLRFQISVFLDVLTSSSCCSVLDHLVSFVIQLLASFISSKRSGLKSLSGKLKYHARFVRAQKSVTDPTEVEALKAIKRSLTDPKGNLSNWNNGDPCTSNWTGVLCNRTLADGYLHVQELRLLNLNLSGTLAPEIGRLFQLQILNFMWNNISGSIPKEIGNIKSLKLLLLNGNQLTGHLPEELGYLPVLDRVQIDQNQITGPVPTSFANLNMAKHFLLDDNNLSGYLPPELYKMPNIKIMLEGNPLCSNDTLVQFCGFESANDTKNLSPPNSNVSCPSQGCPPPYEYSKTSPVNCSCAAPLLIDYRLKSPGFSDFPPYLNAFENDLASELNLYIYQLEIDTYKWQEGPRLLMYLKLFPVNAYTFNRSEVLRIYSLFTTWAISNDDIFGPYELLNFTLLDPYKDEIITSPSSGISKGTLVGVTLAAIACAVILSAIVTLLILRVCKRDSHAISKRHHSSKISIKIDGVRSFTYEEMALATKNFSESTQAGQGGYGKVYKGILADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEESEQMLVYEFMPNGTLRDHLSANSKEPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDIKASNILLDSRFSAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGIVFLELLTGRPPIAHGKNIVREVNDASRSGEIFSVIDGQMGSYPSKYVEKFLSLALKCCQDEPDARPKMAEVVRELENIWSIMPEFNAKIPEYTSSGSGKIFSSPSSSFTSKTPFISLDVSGSGLVSGGEPTINPR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0465 828 SUPERFAMILY Protein kinase-like (PK-like) 484 792 IPR011009 -
Bisa09g0465 828 ProSiteProfiles Protein kinase domain profile. 499 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0465 828 CDD STKc_IRAK 506 771 - -
Bisa09g0465 828 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 575 784 - -
Bisa09g0465 828 SUPERFAMILY L domain-like 83 266 - -
Bisa09g0465 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Bisa09g0465 828 Gene3D Phosphorylase Kinase; domain 1 469 574 - -
Bisa09g0465 828 SMART serkin_6 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0465 828 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Bisa09g0465 828 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 85 245 - -
Bisa09g0465 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 350 791 - -
Bisa09g0465 828 Pfam Leucine rich repeat N-terminal domain 85 124 IPR013210 -
Bisa09g0465 828 FunFam Leucine-rich repeat protein kinase family protein 463 574 - -
Bisa09g0465 828 Pfam Protein kinase domain 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0465 828 Gene3D Ribonuclease Inhibitor 85 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0465 Bisa-ChrBisa09 6706376 6720738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0465 141 782 Receptor kinase-like Gene Family AT5G01950 51.562 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa09g0465 Pkinase 2.1e-47 CL0016