Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0464 ATGGCGTCCTCGATTAGGAAAGGGATGGCCATCGTCATCAACCATAATGATTTCCGCTGCATCTGCGACCTGGTCAAAAATTTACTACCCTTGAGGTTTGATATTCAAATCGCTCTCGATGATGCTTACTACTTCTTCTCTGGGCAAGAAAAACACCCTGCTTGTCTTGTTCGTCAGAGATATATCACAAGTCTGAATCCTGTAACCGACCCCACTGAAGTTGATGCGTTGAAAGCCATCAAGGAGAGTTTGATTGATCCTTATGGAAATCTGAGTAACTGGAATCGTGGAGATCCATGTACATCTAACTGGACAGGAATTTTGTGCTTCAATAGAACATTAGTTGATGGCTATCTACATATTCAAGAATTGCGACTGCTGAATTTTAATTTGTCTGGAACTTTGGCACCAGAGATTGGCAGCTTGTCTTATATGGAAATATTGAACTTTATGTGGAACAACATAAGTGGGAGTATACCAAAGGAAATAGGCAACATCAAAAGTTTGGTACTCTTCCTTCTTGACAATAATAACTTATCAGGATATCTTCCCCCTGAGCTCTCCAGGATGCCAAAAATACGTATAATACAGCTTGATAACAATAACTTTGGCGGGAATATCATTCCAGATTCTTATGGCAACATCTCAAGCTTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTTAGCAGCATACCAAGTCTTCTGTATCTTGACCTCAGTTCCAATCAGTTGAATGAATCGATTCCTTCTAATAGGCTTTCTGAAAAGATAACAACCATAGATTTGTCAAACAACAAGCTAACTGAAACTATTCCATCCTACTTTTCTGGTCTTCCGCGTCTTCAGAGATTGTCACTTGCAAACAATTCATTGAATGGCAGTGTTCCTTCAATCATTTGGCAGAACAAGACTGCAAATGGAACAGAAAGATTTCTCCTACAGTTGCAAAATAATAATCTTACCAGCATATTGGGCAACACTAATCTTCCTCCAAATGTCTCACTCTGGCTTGAGGGAAATCCTCTATGTTCTAATGACACCCTAGCTCAGTTCTGTGGATCTGAAAGTGCCAATAACACTTACTTAGTGGGTCCAACGGGCTCCAATATCACTTGTCAGAGCCAATCATGCCCTCCTCCTTATGAATATTCTAGAAAATCGCCTGTGGAGTGTTTCTGTGCTGCTCCATTGCTAATTGATTATCGGTTGAAAAGTCCTGGATTATCAGATTTTCCTCCATACATAAATGCATTCGAAACCTACCTGACTTCTGCTTCTGCTCTTGATTTATCAATTTATCAGCTTGATATTGCTACCTATACATGGGAAGAGGGACCTCGACTGAGAATGTTCTTGAAGCTTTTTCCCATATCTGTTGATAACAGCAGCTCGCATACCTTCAATAGTAGTGAGGTTTTACGTATTAGAAACAAGATTACAAGATGGGATGTTGATGACAATGATTTGTTTGGACCCTATGAATTAATTGACTTCATTCTTCTGGGTCCTTACAATGATGTGATTGTTCCCTCTCAAAGTTCAGGGATAAGCAAGGGGGCACTGGCTGGCATCATCTTAGGGGCAATTGCCTGTGCAGTTACATTATCTGCGATAGTTACTCTCTTAATACTGAGATTGCGCATGAGAGATTATCGTGCACTTTCAAAACGACATCATTCATCTAGGATTTTAATAAAAATTGATGGTGTGAGGAGCTTCACTTATGGAGAAATGACCTTAGCTACGGATAATTTTAGTGACTCCACTCAAGTTGGCCAAGGGGGTTATGGCAAGGTTTATAAAGGTATTCTTGCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTCAGAGGGAGTTCCTTACAGAAATACAATTACTATCAAGGTTACATCATCGCAATCTCGTGTCTTTGATTGGATACTGTGACGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACACTAAGGGATCATCTTTCTGCTTATTCAAAAGAACCTCTGAGTTTCGATATGAGAATGGGGATTGCACTAGGGTCAGCTAAGGGTATTCTTTACCTGCATACGGAAGCTGACCCTCCAATATTCCACCGAGATGTCAAGTCCAGTAACATATTATTGGACTCTAGGTTCTCAGCCAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATATTGAAGGAGTTGTGCCTGCTCATGTATCTACTGTGGTAAAGGGAACACCGGGTTACCTTGATCCAGAGTACTTCTTAACTCGTAAATTGACTGACAAGAGTGATGTTTATAGCCTTGGTGTTGTATTTCTGGAAATTTTGACAGGGAAGCAACCAATCTCACATGGCAAAAATATCGTTAGAGAGGTTAATGTAGCATACCATTCTGGTGATAAAGTCTCGGTTATTGATAAACGTATGGGGTCCTATCCTTCTGAGTACGCGGAGAGATTCTTGAATCTGGCCCTGAAGTGTTGCCAAGAGGAGACGGATGCACGGCCGAAAATGGCAGAAGTGGTCCGAGAGCTTGAAAATATATGGTCTATGATGCCCGAATCTGATGCAAAGATACCCAAATCTGTATCCAGTGATTCTGGAAAGATATTCAGTTCACCATCTTCGTCCTCTGCTATTAATGCTGCTTTTATATCGCTGGATGTGTCTGGTAGTAACCTTGACAGTGGAGCATCACCGACCATCAGGCCAAGATAG 2766 0.4125 MASSIRKGMAIVINHNDFRCICDLVKNLLPLRFDIQIALDDAYYFFSGQEKHPACLVRQRYITSLNPVTDPTEVDALKAIKESLIDPYGNLSNWNRGDPCTSNWTGILCFNRTLVDGYLHIQELRLLNFNLSGTLAPEIGSLSYMEILNFMWNNISGSIPKEIGNIKSLVLFLLDNNNLSGYLPPELSRMPKIRIIQLDNNNFGGNIIPDSYGNISSLLKLSLRNCNLKGPIPDFSSIPSLLYLDLSSNQLNESIPSNRLSEKITTIDLSNNKLTETIPSYFSGLPRLQRLSLANNSLNGSVPSIIWQNKTANGTERFLLQLQNNNLTSILGNTNLPPNVSLWLEGNPLCSNDTLAQFCGSESANNTYLVGPTGSNITCQSQSCPPPYEYSRKSPVECFCAAPLLIDYRLKSPGLSDFPPYINAFETYLTSASALDLSIYQLDIATYTWEEGPRLRMFLKLFPISVDNSSSHTFNSSEVLRIRNKITRWDVDDNDLFGPYELIDFILLGPYNDVIVPSQSSGISKGALAGIILGAIACAVTLSAIVTLLILRLRMRDYRALSKRHHSSRILIKIDGVRSFTYGEMTLATDNFSDSTQVGQGGYGKVYKGILADGTVVAIKRAQEGSLQGQREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDHLSAYSKEPLSFDMRMGIALGSAKGILYLHTEADPPIFHRDVKSSNILLDSRFSAKVADFGLSRLAPVPDIEGVVPAHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGKQPISHGKNIVREVNVAYHSGDKVSVIDKRMGSYPSEYAERFLNLALKCCQEETDARPKMAEVVRELENIWSMMPESDAKIPKSVSSDSGKIFSSPSSSSAINAAFISLDVSGSNLDSGASPTIRPR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0464 921 SMART serkin_6 592 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0464 921 FunFam Leucine-rich repeat protein kinase family protein 556 667 - -
Bisa09g0464 921 Pfam Leucine rich repeat 263 300 IPR001611 GO:0005515
Bisa09g0464 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Bisa09g0464 921 Pfam Leucine rich repeat N-terminal domain 71 109 IPR013210 -
Bisa09g0464 921 SUPERFAMILY Protein kinase-like (PK-like) 577 880 IPR011009 -
Bisa09g0464 921 Gene3D Ribonuclease Inhibitor 72 188 IPR032675 -
Bisa09g0464 921 SUPERFAMILY L domain-like 69 351 - -
Bisa09g0464 921 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 668 878 - -
Bisa09g0464 921 Gene3D Ribonuclease Inhibitor 260 401 IPR032675 -
Bisa09g0464 921 ProSiteProfiles Protein kinase domain profile. 592 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0464 921 PANTHER RECEPTOR-LIKE PROTEIN 55 169 865 - -
Bisa09g0464 921 Gene3D Transferase(Phosphotransferase) domain 1 668 881 - -
Bisa09g0464 921 FunFam Nuclear pore complex protein NUP107 70 234 - -
Bisa09g0464 921 Gene3D Phosphorylase Kinase; domain 1 562 667 - -
Bisa09g0464 921 Gene3D Ribonuclease Inhibitor 189 259 IPR032675 -
Bisa09g0464 921 Pfam Protein kinase domain 593 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0464 921 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Bisa09g0464 921 CDD STKc_IRAK 598 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0464 Bisa-ChrBisa09 6688790 6701823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0464 69 875 Receptor kinase-like Gene Family AT5G01950 52.875 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa09g0464 Pkinase 4.9e-46 CL0016