Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0457 ATGTCCGTACAGTCTTCTCCGAACCTGCAAGATCTTGCAAACACGAGAACCTCTTTTGAGGGTGATCCAGCAATATGCAAAACAAGAAGAAAACCGCAGCACAGAATCCTCAGAGTCATACTCACTGACCGCGACGCCACTGATTCTGATACTTCCTCCGATGAAGAACACCAACAAAACCCAAAGAGGTTGCGGAAAGTGAAGACACACATCACGCAGATCAGCATCCACCTTCCCTCTTCAAATACCCCTTCTCCTTCTCCTTCATCTTCTTCTCCCTTTCCTTCCTCCTCCTCCTCACCTCACCGTTCAACGGAACCCGTCCCGGCCCGATTCAGGAGATCCGCCCCCTCTCGCCGCCACAACAAGTTCAGAGGCGTTCGCCAGCGGCCGTGGGGACGGTGGGCCGCTGAAATCCGAGACCCGAACCGCCGGAAACGGGTATGGCTCGGGACGTTCGACACGGCGGAGGAAGCTGCGTCGGAGTATGACAAGGCTGCGCTGAAGCTGAAGGGCCCCAACGCCGTTACCAACTTCCCTAACTCCGTCGCGAAGAAGACGACGGAGGCGCCGACCGCCGCGGCAGACGAGACACCGAGCACAGAAGGCGAAGGATCCGCCTCGTACTCCGACGCGGCGGTAGCGTCGCCGACGTCCGTGTTGGCCTACGACGGCGACTCAACGGCGTTCGATAGTTTCCGTTACGGCGACGTGGACGCGTTCGGGTTCGATATCGATGTGCCGTTAAGTCTGCCGGACGTGAACATGGTGCTGTCGAGTCAGCAGTTTGGGAAAGAAGAGTTCGACGAGTTTGACTTCGACGAGTGCTTGACGTGGCCCAACTAA 846 0.5745 MSVQSSPNLQDLANTRTSFEGDPAICKTRRKPQHRILRVILTDRDATDSDTSSDEEHQQNPKRLRKVKTHITQISIHLPSSNTPSPSPSSSSPFPSSSSSPHRSTEPVPARFRRSAPSRRHNKFRGVRQRPWGRWAAEIRDPNRRKRVWLGTFDTAEEAASEYDKAALKLKGPNAVTNFPNSVAKKTTEAPTAAADETPSTEGEGSASYSDAAVASPTSVLAYDGDSTAFDSFRYGDVDAFGFDIDVPLSLPDVNMVLSSQQFGKEEFDEFDFDECLTWPN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0457 281 ProSiteProfiles AP2/ERF domain profile. 123 180 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 MobiDBLite consensus disorder prediction 1 17 - -
Bisa09g0457 281 FunFam Ethylene-responsive transcription factor 2 122 181 - -
Bisa09g0457 281 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 34 222 - -
Bisa09g0457 281 Gene3D AP2/ERF domain 122 182 IPR036955 GO:0003700|GO:0006355
Bisa09g0457 281 SUPERFAMILY DNA-binding domain 123 182 IPR016177 GO:0003677
Bisa09g0457 281 CDD AP2 123 182 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 MobiDBLite consensus disorder prediction 186 210 - -
Bisa09g0457 281 MobiDBLite consensus disorder prediction 1 127 - -
Bisa09g0457 281 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 SMART rav1_2 123 186 IPR001471 GO:0003700|GO:0006355
Bisa09g0457 281 MobiDBLite consensus disorder prediction 36 62 - -
Bisa09g0457 281 PIRSF PTI6 6 281 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0457 Bisa-ChrBisa09 6573245 6574090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0457 27 223 AP2-EREBP Transcription Factor Family AT4G27950 42.180 6.43e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g0457 AP2 3.1e-16 CL0081