Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0456 ATGATGGGCCAAACAAAAGTCCATAATGGGAGTGGCCAAAGTAAGGCCCACAAGTTCCGATTCCCTTCAATCTCTCTTGCTTTACCATCTTTTGCCTCATTTCTAGGGTTTCTTTACACTCTCTTTGGCTCTGAATGTGGTTGTTTTTGCTGTCATGCATTTGAGGTTGTGTTCTCCTTAAATCTTGAAGTTGGGTTGTCATGTGCTGTTAATGCTAATCCTTGTCACTACTTGAAACTATCAGCAATCATGGCAGATGAAACACATAATGGGACTGCAGCAATCATGGCAGATGGAATACATAATGGTACCGCAACAATTACAGAAGATGGAACACATAATAATATGAAGGAGGGCAGTGTAGAAATTGCTCCATTTGATCCTATATTTAAGAAGAAAAAGAACATCGTGATGCAAGATGGTTGCCCTACTGTTGAGCTCGAACAGAAAAAACATGCAACTAACCTTTCTGAGGTGTGTAAAACAAGGCAGAAAACCCATCAAAAGCTTGTCAGAATCATAGTCACTGACCCTGATGCTACTGATTCCGACTCTTCCCTTAGTGAAGATCAAGGAAAACCTGTATCGTCACGAGGGGGGGAGAAGCAAATCACTCGGATCAGCATCAACATTCCCTCAGATTCAGCTCCCTCTTTTCTCTCTATTCCATTTTCTTCCAAGGAAGATCTAACCCACTTCAAGAAGCCTAACAAATTGATCAACGACAATGGCCAAAAGAAGTTCAGAGGTGTTCGCCGGAGGAAATGGGGTCGGTGGGCTGCTGAAATCCGAGATTCAACAAGTCGAAAACGGCTCTGGCTTGGAACCTTTGACACTGCAGAGGAAGCTGCCATGGAGTATGACAAGGCTGCTGTGAGGCTGAAGGGTCCTGGTGCTGTTACTAACTTCCCTCCCTCTGCAATGGAGGATATGCCTGCCACCATCCAAAACAGTCCAAGCACTGAAAGTTTTGCCTCCATCGGTGCACTGGCATCACCAACCTCTGTCCTGGCTTAG 1017 0.4484 MMGQTKVHNGSGQSKAHKFRFPSISLALPSFASFLGFLYTLFGSECGCFCCHAFEVVFSLNLEVGLSCAVNANPCHYLKLSAIMADETHNGTAAIMADGIHNGTATITEDGTHNNMKEGSVEIAPFDPIFKKKKNIVMQDGCPTVELEQKKHATNLSEVCKTRQKTHQKLVRIIVTDPDATDSDSSLSEDQGKPVSSRGGEKQITRISINIPSDSAPSFLSIPFSSKEDLTHFKKPNKLINDNGQKKFRGVRRRKWGRWAAEIRDSTSRKRLWLGTFDTAEEAAMEYDKAAVRLKGPGAVTNFPPSAMEDMPATIQNSPSTESFASIGALASPTSVLA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0456 338 ProSiteProfiles AP2/ERF domain profile. 247 304 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 Gene3D AP2/ERF domain 246 305 IPR036955 GO:0003700|GO:0006355
Bisa09g0456 338 Pfam AP2 domain 247 296 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 CDD AP2 246 306 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 167 337 - -
Bisa09g0456 338 MobiDBLite consensus disorder prediction 176 202 - -
Bisa09g0456 338 SMART rav1_2 247 310 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 SUPERFAMILY DNA-binding domain 247 306 IPR016177 GO:0003677
Bisa09g0456 338 PRINTS Ethylene responsive element binding protein signature 270 286 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 PRINTS Ethylene responsive element binding protein signature 248 259 IPR001471 GO:0003700|GO:0006355
Bisa09g0456 338 MobiDBLite consensus disorder prediction 179 193 - -
Bisa09g0456 338 FunFam Ethylene-responsive transcription factor 2 246 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0456 Bisa-ChrBisa09 6556952 6560686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0456 150 337 AP2-EREBP Transcription Factor Family AT4G27950 38.384 8.35e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g0456 AP2 4.4e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0456 09 6556952 6560686 Bisa05g2985 05 71561211 71562029 CCT
Bisa09g0456 09 6556952 6560686 Bisa09g0456 09 6556952 6560686 ECH