Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0444 ATGAATTTTTGCGCCAACCCTGACAATGGAGTTATTTTGGAGCTGGGAGAACAATTGATTTTCAAATTGATGGGGTCCGACGTTTGCGTGTATGTTTCGTGTGGGTCTGCCACTGCTCATGAATGGAAGAAGGGGTGGCCTCTGCGATCTGGTGGATTCGCTCAATTCTGCAACAAGTGCGGATCTGCCTACAAGGAATCTGTTTTCTGCAGTAAATTCCATCGTGAAGAAACTGGTTGGAGGGATTGCAGCTTTTGCAACAAACCTATCCACTGTGGATGCATAGTATCTAGGTTTTTGTTCGACTACCTTGATTTTGGCGGTATAGGATGCATTAGCTGTATAAAGGCATCCCGATTTCATTTGATGCAGGGTGCTAAAAAACCTAATGGGGCTGCTACATCAACCATAGAAAGTGCAAGTGATCAACATTCTGCTCATATTGATGGAAGATTGTTTGTGGAAGGCACTGAGGGAGGAAAACTTATGCAATTATGCAGAATTGTTGAAGCTAGCGAGGCTACTCGTTGTCATCAATCCCATAGAGATGAAATAATTACATCCAGTGGGCTAAACAACCAAGAAGTTAATAGTCCAATCAGGGAAGTGAATCCAGGAATTTCGAATTTGATTACAGCATCTATTCAGCCATTAACATTTCCTATGTTAGAAAATAATAGACCATCATGGGAGATTACAAATACACATGAATCACCTGCACAGCCATCTTTGAGTATGTCGCTGGGAACTCCATCTAGAAACTCTACCTTGCCCTGTGCTAGAGAGACCATAGAAGAAAGGCTTGAGGGCAAACCATCTCCTTCTGTTCATCAAGGGCAAAGATCTCGCCCTATATTGCCTAAACCATCGACGACTGGGAATACCATGAATGTAGAAACAAATAAAGGAATAAATTCTCAGGCGCGTGTTGCCCGGCCACCTGCTGAGGGAAGGGGCAAGAATCAGTTACTTCCTCGATACTGGCCTAGGATTACTGACCAAGAGCTGGAGCAATTGTCTGGAAATTTGAAGTCCACTGTAGTACCATTGTTTGAGAAGGTGTTGAGTGCTAGTGATGCAGGTCGAATTGGTCGCCTTGTTCTTCCAAAAGCTTGTGCTGAAGCATATTTTCCTCCTATTTCTCAATCAGAAGGTCTTCCTTTGCGAATGCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGCAGGATGTATGTACTGGAGGGTGTGACCCCTTGCATACAGGCAATGCAATTATGTGCGGGTGATACTGTAACATTTAGTAAAATTGATCCTGGGGGCAAGCTTGTAATGGGCTTCAGAAAGGCATCAAATTCTGCAGAAACCCAGGATGCCTCTACGTCTGCACACTCTAATGGGATTTCAACAAAGGAAACAACCTTTTCTAGTGCAACAGAGAACATGCCCTCTGGAAGTACTTATTCTGATCTTCTTCACTCAATGGAAGGGAACAGGGAACCTCACTTAAATGGACAATTAGAAAACCTGCATTTGGGTAGCAGGGATGCTGATTTGCCTAAAGCTGAAAATTGTGGGCAGATGGCAAACAGTGATTTACTGCAGCAATCTGCTTCAGTTTCAGAGAAGAAAAGGACTTGGAATATTGGGCCAAAAAGTAAGAGATTGCTTATTCATTGTGAAGATGCGCTGGAGTTGAGGCTTACATGGGAAGAAGCACAGGACTTACTTCGTCCGCCACCTAGTGTTCAGCCAAGCTTTGTCACAATTGAGGACCATGTATTTGAAGAGTATAATGAACCCCCAGTTTTTGGAAAGAGAACTGTATTCAGATGCTGTCCATCTGGGGGACAAAAACAGTGGGCTCCATGTGATGATTGCTCTAAATGGCGAAGGCTGCCTGTTGATGTTCTTCTACCTCCCAAGTGGACTTGTTCTGAAAATGTCTGGGACGCAAGCAGGTCTTCGTGTTCTGCACCAGAGGAGCTGAGTCCTAAGGAGTTGGAAAATCTTCTGAAAACCAGAAAAGATTTTAAGAAGCGAAGAATTGCGGAAAATAATAAGTCATCCCAAGAACTTGAACCATCTGGCTTAGATGCTCTTGCTAGGGCAGCAGTTTTGGGAGACAATCTCATTGAGCCTTCTGAGTCATCAGCCGCCACCACCAGACATCCTAGGCACCGTCCTGGATGCACTTGCATCGTGTGCATTCAACCACCGAGTGGGAAGGGGAGACATCCTCCAACTTGTACTTGCTATGTGTGCATGACTGTGAAAAGGCGTTTCAAAACCCTTATGCTGCGCAAGAAGAAACGTCAATCAGAGCGTGAAGCCGGTTCTGCCCAGACGGATCAAGATGAGTCAGATATGAATGAAGCACCAAGAGAGGAGGCAAGTCATTTGGCACAAGAGGGAAACATAAATGGAAGACAGCCTGAGGTGGGCGAATCCAGTGCTGGACAAATAGATCTGAATTGTCATCCCGATCGCGAGGACATGCTAGTTGATGTACCAGGACCAAGCTCGAATGGTCATCTGGAAACAACGAGCTATCAGTTGCAGGAATATATGAATCAAAATGGTTCAACTGGAGAAGGTCAGAGATACCTAAGTAATGGGGGAAGCTTTGCATCAGTTGTCTGGGAGAGGGAAAGAAGGGAAAGAAGAGACGGGGAGGTATATGATCCCGATTCAAATCACAACAATCATCATTAG 2718 0.4455 MNFCANPDNGVILELGEQLIFKLMGSDVCVYVSCGSATAHEWKKGWPLRSGGFAQFCNKCGSAYKESVFCSKFHREETGWRDCSFCNKPIHCGCIVSRFLFDYLDFGGIGCISCIKASRFHLMQGAKKPNGAATSTIESASDQHSAHIDGRLFVEGTEGGKLMQLCRIVEASEATRCHQSHRDEIITSSGLNNQEVNSPIREVNPGISNLITASIQPLTFPMLENNRPSWEITNTHESPAQPSLSMSLGTPSRNSTLPCARETIEERLEGKPSPSVHQGQRSRPILPKPSTTGNTMNVETNKGINSQARVARPPAEGRGKNQLLPRYWPRITDQELEQLSGNLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLCAGDTVTFSKIDPGGKLVMGFRKASNSAETQDASTSAHSNGISTKETTFSSATENMPSGSTYSDLLHSMEGNREPHLNGQLENLHLGSRDADLPKAENCGQMANSDLLQQSASVSEKKRTWNIGPKSKRLLIHCEDALELRLTWEEAQDLLRPPPSVQPSFVTIEDHVFEEYNEPPVFGKRTVFRCCPSGGQKQWAPCDDCSKWRRLPVDVLLPPKWTCSENVWDASRSSCSAPEELSPKELENLLKTRKDFKKRRIAENNKSSQELEPSGLDALARAAVLGDNLIEPSESSAATTRHPRHRPGCTCIVCIQPPSGKGRHPPTCTCYVCMTVKRRFKTLMLRKKKRQSEREAGSAQTDQDESDMNEAPREEASHLAQEGNINGRQPEVGESSAGQIDLNCHPDREDMLVDVPGPSSNGHLETTSYQLQEYMNQNGSTGEGQRYLSNGGSFASVVWERERRERRDGEVYDPDSNHNNHH 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0444 905 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 27 866 - -
Bisa09g0444 905 MobiDBLite consensus disorder prediction 275 299 - -
Bisa09g0444 905 Gene3D - 619 674 - -
Bisa09g0444 905 Gene3D - 329 456 IPR015300 -
Bisa09g0444 905 MobiDBLite consensus disorder prediction 236 259 - -
Bisa09g0444 905 MobiDBLite consensus disorder prediction 771 800 - -
Bisa09g0444 905 Pfam CW-type Zinc Finger 621 663 IPR011124 GO:0008270
Bisa09g0444 905 SMART B3_2 351 452 IPR003340 GO:0003677
Bisa09g0444 905 MobiDBLite consensus disorder prediction 455 483 - -
Bisa09g0444 905 MobiDBLite consensus disorder prediction 236 299 - -
Bisa09g0444 905 ProSiteProfiles Zinc finger CW-type profile. 616 666 IPR011124 GO:0008270
Bisa09g0444 905 MobiDBLite consensus disorder prediction 768 827 - -
Bisa09g0444 905 ProSiteProfiles B3 DNA-binding domain profile. 351 452 IPR003340 GO:0003677
Bisa09g0444 905 SUPERFAMILY DNA-binding pseudobarrel domain 349 451 IPR015300 -
Bisa09g0444 905 Pfam B3 DNA binding domain 351 450 IPR003340 GO:0003677
Bisa09g0444 905 MobiDBLite consensus disorder prediction 885 905 - -
Bisa09g0444 905 CDD B3_DNA 349 450 IPR003340 GO:0003677
Bisa09g0444 905 FunFam B3 domain-containing transcription repressor VAL1 329 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0444 Bisa-ChrBisa09 6397999 6405011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0444 24 834 B3 DNA Binding Superfamily AT2G30470 49.511 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa09g0444 B3 7.8e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0444 09 6397999 6405011 Bisa09g0444 09 6397999 6405011 ECH