Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0418 ATGGAGAACAAATCAAATGTCCTAATGCAAAGGTATGAGTTAGGAAGATTGTTAGGCCAAGGTACCTTTGGTAAGGTGTATTATGCCCGAAGTGCAGTAAACAATCAGAGTGTGGCTATTAAAGTGATTGACAAAGATAAGGTTATGAAATCTGGGCAAGTTGATCGCATCAAGCGTGAAATATCTGTTATGAGAAAGGTTAGACATCCCAATATTATACAGCTTTTTGAGGTTATGGCAACCAAGAGTAAGATTTACTTTGTCATGGAATATGCTAAAGGGGGTGAACTCTTCGATAAGGTGGCTAAAAAAGGGAAGCTCAAAGAAGATGCTGCACATAAATATTTCCAGCAGCTTGTCAATGCAGTTGATTTTTGTCACAGTAGAGGTGTGTACCATCGAGATATAAAGCCAGAGAACCTTTTGCTGGATGAAAATGGGGATCTGAAGGTTTCTGATTTCGGGTTGAGTGCTCTTGCTGAATCCAAGTGGCAAGATGGCTTACTACATACACCTTGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGAAAAGGGTATGACGGTGCCAAAGCTGATATTTGGTCTTGTGGGGTAGTCTTGTTTGTCTTATTGGCAGGTTATCTCCCTTTTCATGATTCAAATTTGATAGAGATGTATAGGAAGATTAGCAAAGCAGAATTTAAATGTCCTAATTGGTTCTCTCCAGGAGCTCGCAAACTAGTATGCAAGATACTGGATCCAGATCCTGATACTAGGATTTCTATGGCTATGGTTAGGGAATGTGATTGGTTCAAGAAAGGGCCAATTGCTAAACAAAAAATGCCTGTGGTGGAAAAAAAGGCTGTCTCTTCATCAGGTACAAATCCTTCTGATCGAAGTGATGAAAGTGATAGTACAGCAGCAGAAACGACGCAAGAGGCAGTGGTGCCGACCAGTATAAATGCATTTGATATTATCTCCCTTTCTGCTGGTTTTGATCTTTCCGGATTCTTTGAAGACAGTTTTAAGAATAGAGAAGCAAGATTTACTTCAAGACAACCTGCACCAGTCATCATCTCTAAGCTGGAAGAAACTGCTAGGCGTCTCAAGATGAAAATAAAGAAGAAAGCCGCAGGTTTGTTAAAATTAGAGGGCCTTAAGGAAGGTAGGAAGGGTATTTTATCTGTGGATGCAGAGATATTTGAGGTTACTCCATATTTCCATTTGGTGGAGGTGAAAAAATCAGATGGAGATACATGGGAATTTCAGAAAATATTGAAGGAGGATATAAGGCCTGCTCTTCAGGATATTGTTTGGGTTTGGCAAGGTGATGACCAACAACAGCAATCACAGCAATCACAGCAACAACTACAGACACGTGACCAGCAGCCGCAACAACCACAGCTATAA 1398 0.407 MENKSNVLMQRYELGRLLGQGTFGKVYYARSAVNNQSVAIKVIDKDKVMKSGQVDRIKREISVMRKVRHPNIIQLFEVMATKSKIYFVMEYAKGGELFDKVAKKGKLKEDAAHKYFQQLVNAVDFCHSRGVYHRDIKPENLLLDENGDLKVSDFGLSALAESKWQDGLLHTPCGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYLPFHDSNLIEMYRKISKAEFKCPNWFSPGARKLVCKILDPDPDTRISMAMVRECDWFKKGPIAKQKMPVVEKKAVSSSGTNPSDRSDESDSTAAETTQEAVVPTSINAFDIISLSAGFDLSGFFEDSFKNREARFTSRQPAPVIISKLEETARRLKMKIKKKAAGLLKLEGLKEGRKGILSVDAEIFEVTPYFHLVEVKKSDGDTWEFQKILKEDIRPALQDIVWVWQGDDQQQQSQQSQQQLQTRDQQPQQPQL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0418 465 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Bisa09g0418 465 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0418 465 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0418 465 Gene3D Kinase associated domain 1, KA1 311 436 - -
Bisa09g0418 465 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 430 - -
Bisa09g0418 465 Pfam NAF domain 313 371 IPR004041 GO:0007165
Bisa09g0418 465 MobiDBLite consensus disorder prediction 441 465 - -
Bisa09g0418 465 MobiDBLite consensus disorder prediction 284 308 - -
Bisa09g0418 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Bisa09g0418 465 CDD STKc_SnRK3 11 266 - -
Bisa09g0418 465 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0418 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bisa09g0418 465 Gene3D Transferase(Phosphotransferase) domain 1 92 290 - -
Bisa09g0418 465 CDD CIPK_C 317 431 - -
Bisa09g0418 465 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Bisa09g0418 465 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Bisa09g0418 465 MobiDBLite consensus disorder prediction 278 308 - -
Bisa09g0418 465 FunFam Non-specific serine/threonine protein kinase 2 296 - -
Bisa09g0418 465 FunFam Non-specific serine/threonine protein kinase 311 435 - -
Bisa09g0418 465 SUPERFAMILY Protein kinase-like (PK-like) 8 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0418 Bisa-ChrBisa09 6042322 6043719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0418 1 446 CBL-interacting serine-threonine protein kinases AT5G58380 67.686 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa09g0418 Pkinase 5.1e-77 CL0016