Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0417 ATGTCAAATTACGAAGGTTACCACGGAGACGAAACGGCGTCGGTTCCGTTCACGTGGGAATCGCAGCCAGGTACCCCCAAGGTCAAATTCCGTGACACCCCTCTCCCTCCTCTCACCCCTCCACCTTCTTACACTTACTCCATTAACAAACCCCATAACAACAAATCTTCTTCTTCTTCTTCTTCTTCAAAGCCGAATCTCTTCCCGTCTATATTCCCCAAGCACACCGCCAGAAAAGCGCGTGTTCTTCAGCGGCCTCCGCCGTCCCCTGCAAATGCTTCGCCGGCTTTCTCGTTTTCTTCTTCTACCTCCTCGTGCTCGTCTTCGTCGTATAATTCTAGGTCAGCGTCGCCGGCGCGGCTGAGATCGCGATCTGTGCCGTCTTCGCCGGTGAGACGTCAGAGGAAGAAGGAGGAAGAGGACGTGGATGTTTCGGGATTCTGTTTTGGGAATGCGGGGTCGAGAGGGTGCTATTCCTCCATGATCAAGAAGCTGCTACTCCGAGATTTTAAATACTCCTTCACCTGTTTGTGTTTGTCCCTCACAGAGAATCCTTCCTCCTCACAGCCCATCATTCGGATCAAGACAATCACAGGCATGCTTGGATGTCCAGAAACAGAACGAGCAGAGGAGAGAGCGAAGAGCACAGCAGAGGTAGCAGAAGCAGCAGCATCTTGTCAAATGGGAAGGAGCCATTTCTATGGACCTGTAGCTTCATCAGGGACAACCTTAAACACAGTCACTCCTTGCGCTGCATGCAAGCTTCTGAGACGAAGATGTGCTGAAGAATGCCCTTTCTCTCCTTATTTCTCACCCCACGAACCTCAGAAGTTTGCAGCTGTTCATAAAGTGTTTGGTGCAAGCAATGTTTCCAAGATGCTAATGGAGGTGCCTGATAGCCAAAGAGCCGATGCTGCAAACAGTCTGGTGTATGAGGCTAACCTGAGGTTGAGGGACCCAGTGTATGGATGCATGGGTGCAATATCAGCTTTGCAGCATCAAGTTCAGTCATTACAGGCAGAGCTAAATGCAGTAGGAGCTGAGATTATGAAGTACAAGTACAGAGAGGCTGCTAGTCAGATCATTTCTTCTCATGGAGCCATGGTTTCTTCAGTGGAAGAGTCACAACAAGGTCTTGCTCAACCTCCTCCAAAGCCATCGTCATTACCTTCTGCTTCTGTTGTTCTTTCAACCCTGTCTAATTCATCTTCCACTTCTTCTGTATACACTCCACCCACCAAGAGCACAATGAGCCACGGATCCATTTCCAGTGAAAATGTGCCTTACTTTGTCTGA 1296 0.4938 MSNYEGYHGDETASVPFTWESQPGTPKVKFRDTPLPPLTPPPSYTYSINKPHNNKSSSSSSSSKPNLFPSIFPKHTARKARVLQRPPPSPANASPAFSFSSSTSSCSSSSYNSRSASPARLRSRSVPSSPVRRQRKKEEEDVDVSGFCFGNAGSRGCYSSMIKKLLLRDFKYSFTCLCLSLTENPSSSQPIIRIKTITGMLGCPETERAEERAKSTAEVAEAAASCQMGRSHFYGPVASSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPDSQRADAANSLVYEANLRLRDPVYGCMGAISALQHQVQSLQAELNAVGAEIMKYKYREAASQIISSHGAMVSSVEESQQGLAQPPPKPSSLPSASVVLSTLSNSSSTSSVYTPPTKSTMSHGSISSENVPYFV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0417 431 MobiDBLite consensus disorder prediction 94 128 - -
Bisa09g0417 431 Coils Coil 328 348 - -
Bisa09g0417 431 ProSiteProfiles LOB domain profile. 248 349 IPR004883 -
Bisa09g0417 431 MobiDBLite consensus disorder prediction 373 431 - -
Bisa09g0417 431 MobiDBLite consensus disorder prediction 45 69 - -
Bisa09g0417 431 MobiDBLite consensus disorder prediction 390 425 - -
Bisa09g0417 431 MobiDBLite consensus disorder prediction 1 137 - -
Bisa09g0417 431 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 245 385 - -
Bisa09g0417 431 Pfam Lateral organ boundaries (LOB) domain 249 345 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0417 Bisa-ChrBisa09 6007477 6015119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0417 241 359 AS2 family AT2G30340 84.034 1.11e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa09g0417 LOB 2.8e-40 No_clan