Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0396 ATGGCATCTTCTTCTGGTAGTCTCGATACCTCTGCCAACTCCCACCCCACCTTCACTTTCTCCCCCCTCCCATTCATGACCACCTCCTTCTCCGACCTCCTGGCTTCTCCCACCGACGACAACTCCCCCGCCGATAAGCCACGCGGACTGTCGGACCGCATAGCCGAGCGAACCGGGTCAGGTATCCCCAAGTTCAAGTCGATCCCACCTCCTTCTCTGCCTCTCTCTCCTCCTGCCATTTCTCCCTCTTCATATTTTGCTATCCCTGCCGGGTTGAGCCCGGCTGAGCTTCTCGACTCTCCTGTTCTCCTTAATGGTTCTAACATTTTGCCATCCCCAACTACTGGAGCATTCGCTGCTCAGGCCTACAATTGGAAAAGCAGCACCGCCCAGAACCACCGAAACATCAAAGAAGAAGAGAAGAACTTCTCAAGCTTCTCGTTCCAACCCCAACCTAGGCCTCCTCTTCCACCCACCACAACATTTCAACCCTCAGCCGCCTCGAATCAAACTCAACAGGCATGGAGTTTTCAAGAAGCGAGCAAGCAAGAGAGTTATTCTTCAGGAAAGAGTATGGTGAAAAGCGAAAACGCTAATATGCAGAGGCAGCAGAGCTATTCCACCGAGATGGTTAACAATGTCCAAACAAACCAAAACAGCGGGTTTCAACCGGATTACCCCAATTACCAACCACAAGCTCAGACCTTGAGCAGAAGATCAGATGATGGGTACAACTGGAGAAAGTATGGGCAGAAGCAAGTGAAAGGAAGCGAGAATCCGAGAAGCTACTACAAATGCACATACCCCAATTGCCCCACAAAGAAGAAGGTTGAGAGGTCTTTGGATGGTCAAATCACTGAGATAGTTTACAAGGGGACACATAACCATCCCAAGCCTCAGTCTACTAGGAGAAACTCATCATCTGCCTCTTCTCTTGCAATTCCTGCATCAAATTCTTTGACTGCTGAAATCCCAGATCAGCCCTTTGCTTCCCACGGAAATGGACAAATGGATTCGGCTGCAACGCCTGAGAACTCATCGATATCAATGGGAGATGATGATTTTGAGCAGAGTTCCCAGAGGAGTAGATCAGGAGGAGATGAGTTCGATGAAGATGAACCTGACGCCAAAAGATGGAAAATAGAAGGTGAAAATGAGGGTATGTCGGCGGCTGGAAGTAGAACAGTGAGAGAGCCAAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGATGATGGATACAGATGGAGGAAATACGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGCACACATCCAGGATGTCCAGTGAGGAAGCACGTAGAGAGAGCCTCACATGACCTAAGGGCAGTGATCACAACCTACGAGGGGAAGCATAACCATGACGTGCCTGCAGCCAGAGGCAGTGGAAACCATTCTGTGAACAGGCCTCTGTTAAACAATACCACAAACACCAACAATGCACCCACAGCCATAAGGCCTTCGGCTGTCGTACACAACACTAACAATAATTCCATTCAGAGTTTTAGGGCCCCACCATCTGCACCAGAAGGGCAATCACCCTTCACTCTGGAGATGCTTCAGAGTCCAGGAAGCTTTGGGTTCTCAGGGTTTGGGAATCCAATGGGGTCTTACATGAATCATCATCATCAGCCACAGCAGCAGCAGCAACCACAATCTGAAAATGGATTTTCTTCCAGAGCCAAGGAAGAGCCCAGAGATGACATGTTTCTTGAGTCCCTGCTATGCTGA 1776 0.491 MASSSGSLDTSANSHPTFTFSPLPFMTTSFSDLLASPTDDNSPADKPRGLSDRIAERTGSGIPKFKSIPPPSLPLSPPAISPSSYFAIPAGLSPAELLDSPVLLNGSNILPSPTTGAFAAQAYNWKSSTAQNHRNIKEEEKNFSSFSFQPQPRPPLPPTTTFQPSAASNQTQQAWSFQEASKQESYSSGKSMVKSENANMQRQQSYSTEMVNNVQTNQNSGFQPDYPNYQPQAQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSASSLAIPASNSLTAEIPDQPFASHGNGQMDSAATPENSSISMGDDDFEQSSQRSRSGGDEFDEDEPDAKRWKIEGENEGMSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNHSVNRPLLNNTTNTNNAPTAIRPSAVVHNTNNNSIQSFRAPPSAPEGQSPFTLEMLQSPGSFGFSGFGNPMGSYMNHHHQPQQQQQPQSENGFSSRAKEEPRDDMFLESLLC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0396 591 Gene3D WRKY domain 228 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 481 498 - -
Bisa09g0396 591 Gene3D WRKY domain 399 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 162 240 - -
Bisa09g0396 591 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 502 IPR044810 GO:0003700
Bisa09g0396 591 MobiDBLite consensus disorder prediction 290 395 - -
Bisa09g0396 591 MobiDBLite consensus disorder prediction 141 245 - -
Bisa09g0396 591 FunFam WRKY transcription factor 230 300 - -
Bisa09g0396 591 MobiDBLite consensus disorder prediction 295 325 - -
Bisa09g0396 591 MobiDBLite consensus disorder prediction 356 384 - -
Bisa09g0396 591 SMART WRKY_cls 412 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 554 573 - -
Bisa09g0396 591 FunFam WRKY transcription factor 33 399 465 - -
Bisa09g0396 591 MobiDBLite consensus disorder prediction 332 355 - -
Bisa09g0396 591 MobiDBLite consensus disorder prediction 512 591 - -
Bisa09g0396 591 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 529 543 - -
Bisa09g0396 591 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 Pfam WRKY DNA -binding domain 413 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 31 74 - -
Bisa09g0396 591 SUPERFAMILY WRKY DNA-binding domain 404 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 MobiDBLite consensus disorder prediction 468 498 - -
Bisa09g0396 591 ProSiteProfiles WRKY domain profile. 241 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0396 591 ProSiteProfiles WRKY domain profile. 407 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0396 Bisa-ChrBisa09 5670889 5673639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0396 238 590 WRKY Transcription Factor Family AT2G38470 56.011 3.62e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g0396 WRKY 1.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0396 09 5670889 5673639 Bisa09g0396 09 5670889 5673639 ECH