LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g0389	ATGGAGACCGGGAATGTTAGTGTGACCGATCATTTAGCCGTAGATATTATTGATTCTGGAAATGGAGGTGATTACAGCAGTCACCGCCAGGAATTACAGTCGTTACACAGAACGTCAGATGATGGGAAGGAGTGCTCGCACGTGTACAGCAGCTGCCGCAGAGAATTCTTGGAGGAGAGCTTCTCGAGGTTGGGGTTGCGGAAGCTCAGCATCGAAGACGTTCACAAGATGTCGTGGTGTGAGCTTCAAAAAGAGATTAAAATATGGATTAAAGCTTCCAAGGAGGCTCTTCGGATACTTTTCCCGAGTGAACGGCGGCTTTGCGACCGCGAGTTCTTCGGATTTTCCTCTGCTTCCGATCTCTCTTTCATGGAGATCTGCCGGGATTGGACGATTCAGCTTCTGAATTTCGCCTATGCCGTCGCAACCGGGAGAAGAGCGCCGGAGCGTTTGCTGAGAATACTGGACATGTTTGAGGCATTGAGTGACCTAATTCCAGAATTTGAATCGTTGTTCTCCGATCATTACTGTGTTTTCCTGAGAAACGAGGCACTCACAATCTGCAAGAGGCTTGGTGAAGCAATCAGAGGCACTATCACGGAAGTGGAGATTGTACTTCGTCGTGACCTAGCAAGTCCAGTCGTTTTCGTCGGTGGGATTGATCCCGTTACGCGATGCGTGGCGAACTACCTTCTCACCGCTTGCAAATACCGGCAGACCCTCGAGCAAGTGTTTCGAGATAATGGATTTCCATGGAAGGAGTACCAGAAGCTTGACGATCGAGTGGCATCCACTTCTTCACTATCTGTGCAAATGGCTTCGATTATGGAGGTATTAGAGAGCAATCTGGAAGCCAAGGCCAAAATCTATATGGACCCTGCTTTGTGCTCTGTTTTCATGATGAACAATGAGAGGTACATTGTTCAGAAGGCAAAAAATAGCGAGCTGGGAACACTATTGGGCGATGATTGGATCCGAAAACACAATGCGAAAGTTCGAAAATACCATGTGAACTATCAAAGAAGCTCATGGAATGAGGTGCTGAGTTTGTTGAAGCTAGACGATGGATCATCGGCTGCACCTAATGCTGCAAAGACCATGAAGGAGAAGCTCAAGTTGTTCAACATGCAGTTTGAGGAGATATGGAGGGTTCAATCAACATGGTTTGTATTTGATGAGCAGTTGAGGGAAGAGATTAGGATTTCCCTGAAAAAGATATTGTTACCGGCATATAGAAACTTCATTGTGATGTTCCAGAATCTTCCAAAAATGGCAAAGCATGCTGATAAGTATATTAGGCGCCTGGATCCTGACCTGTGTGGAAATCAGTTTTGTTATAGCTGTGGATCCGATTGGAATCAACATCATGGAACAAGCCATCCAGATATGAGAATAGATCATGAGGATGAATTAGAGTTGAGATTTAAGCTTTCCATGTTGCAAAGTTGGATAACTCCACATGTTGTCAGTTCAAGTTTTCCATGCAACTTTTATGGAGTGAGAGAATTCCTCAACAAGAATGGGTATAATGTACGTGGCTGCAACAATATCTCGAAAGAAGCATTAAATGGTGAGCATCTCAGTCTTCTCATTTGGTTTTCTGGTGAGGATGATCGTGTATTTCTAATAATATGTCGTAAATGTCAGCATAAACCAGCCTGCTTCCTGGAAGAAGTTGTTGTAGCAGAGGCAAAAGCTTTGTCAGCTTTTGATTGTATTGTTTGGAGTCTGAGTTCTGAATCGCTATGCAATTTCTACCGCTTGGTCTCCATGCTTTCAAAGTTATTTAAAAGGGTAAGCATCCCACGGGAGGAAGCCCCACCACCACTATTTTACGCAAACCAAGTTCATGCAGTTCCTGCTTTACGATTTGCTTCTCAGGATTACTTGAAATAA	1896	0.4446	METGNVSVTDHLAVDIIDSGNGGDYSSHRQELQSLHRTSDDGKECSHVYSSCRREFLEESFSRLGLRKLSIEDVHKMSWCELQKEIKIWIKASKEALRILFPSERRLCDREFFGFSSASDLSFMEICRDWTIQLLNFAYAVATGRRAPERLLRILDMFEALSDLIPEFESLFSDHYCVFLRNEALTICKRLGEAIRGTITEVEIVLRRDLASPVVFVGGIDPVTRCVANYLLTACKYRQTLEQVFRDNGFPWKEYQKLDDRVASTSSLSVQMASIMEVLESNLEAKAKIYMDPALCSVFMMNNERYIVQKAKNSELGTLLGDDWIRKHNAKVRKYHVNYQRSSWNEVLSLLKLDDGSSAAPNAAKTMKEKLKLFNMQFEEIWRVQSTWFVFDEQLREEIRISLKKILLPAYRNFIVMFQNLPKMAKHADKYIRRLDPDLCGNQFCYSCGSDWNQHHGTSHPDMRIDHEDELELRFKLSMLQSWITPHVVSSSFPCNFYGVREFLNKNGYNVRGCNNISKEALNGEHLSLLIWFSGEDDRVFLIICRKCQHKPACFLEEVVVAEAKALSAFDCIVWSLSSESLCNFYRLVSMLSKLFKRVSIPREEAPPPLFYANQVHAVPALRFASQDYLK	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g0389	631	SUPERFAMILY	Cullin repeat-like	39	433	IPR016159	-
	Bisa09g0389	631	Gene3D	Exocyst complex component Exo70	11	439	-	-
	Bisa09g0389	631	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	39	433	IPR004140	GO:0000145\|GO:0006887
	Bisa09g0389	631	Pfam	Exo70 exocyst complex subunit	89	437	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g0389	Bisa-ChrBisa09	5602809	5611390	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g0389	42	433	EXO70 exocyst subunit family	AT5G58430	65.140	6.30e-174	507