Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0346 ATGGAAGAAGGGTTGGTGATGTCGATGGTGATCGTGCTATGTTTGTTCCCTCTGAGCCTCTCTTCTTCACCTCTCAAGTACAGCGAAGGTTTGGCGTTGCTAAAGTTGAGAGATGGAGTGGGGAGGGACCCTTCTGAAGCTTTATCCGATTCGAATATTAATGGCCAGTGTTCATGGTTCGGAGTGCAATGCTCCCTCCACGCCAAACTTGTCTCCTTGCGGAAACTTCTTCAAAGAGCAAAATCAGGAAGTGAAAGGAATACTGAGAAAGACTCTGTTTCACCATCACCATTTTCCTCTTCATTACCACCTGATTCTGAGCATTTCTCACCATCTGCTTCAACCCCATCACCATATTCACCATCTCCATCTCCATCTCCATCCGCTACTTATCTCGCACCTTCAACTACACTTTCACCAATGGTGACAGCACCAGTTACAAGCATATCAGTACCTGCAACTCCACCTAGTGTTGTGTCCACAACACCACAGTCCAATTGGATTTCAGCGCCTTCCCCTGCTTCCTTCTGGAACCATGGCAATTTCAAGCCCCAAAAGACTTTGATCATTTGGTCTGCAGCTGGGGGTGTATCCTTACTGGTTTTTGTGTCTGCCATTGCTTTTGCTTGCTTCAGAAATAGCAAGGTTGTCACTGTTAAACCTTGGGCCACAGGGTTAAGTGGGCAGCTGCAGAAAGCTTTTGTAGCAGGTGTGCCAAATCTCAGGAGAGCAGAAATTCAAGCAGCTTGCGAATATTTCAGCAACATTATCGGTTCTATCCCAAATGGGACTGTTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCCTCTGCAGTCACTTCATCAAAAAACTGGTCTAAAACTATGGAAGCTCAATTCAGAAAAAAGATAGAGACATTATCCAGAGTGAACCACAAGAACTTTGTGAACCTTATTGGGTATTGTGAAGAGAAGAAGCCATTCACAAGAATGATGGTTTTTGAGTATGCTCCCAATGGAACCCTCTTTGAACATCTACACATCAGAGAAGCAGAGCAGCTAGACTGGGGAATGAGAGTGAGAATAGCTATGGCAATAGCATATTGTCTAGAGCATATGCATCAGCTGGAACCACCCATTTCCCTCAGAAACCTGCAATCTTCATCTATATACCTTACTGAAGACTATGCTGCTCAACTATCAGATCTAGCTTTCTGGAATGACATGGCTGCTTCAAGGAAAATTTCAGATTCTGCTGCCACACAGCTCTTGGAACCACCATCAACGTATATAAAAAGCAATGTTTACAGCTTTGGAATCATACTGTTTGAGATGATCACAGGGAGGATTCATTGTGATGAGGAAAATGGCTTTCTGGCACAATACCTAGAAAGGGGGCATCCCTTGAGAGATATGGTGGATCCAACCCTGAACTCTGTGGAGCCAGAAGAGATTGAGAAATGGTGGGAAGTGGTTAAAGAGTGTGTGCACTCAGAGGCAGAGAGAAGACCAAGTATGAGAGAGGTAGCAGGAAGGTTGAAGGAGATAACTGGAATGGGGCCTGAGGGAGCAACTCCAAAATTATCCCCTCTTTGGTGGGCAGAACTTGAAATTATGTCCACGGATTCAAGCTGA 1626 0.4496 MEEGLVMSMVIVLCLFPLSLSSSPLKYSEGLALLKLRDGVGRDPSEALSDSNINGQCSWFGVQCSLHAKLVSLRKLLQRAKSGSERNTEKDSVSPSPFSSSLPPDSEHFSPSASTPSPYSPSPSPSPSATYLAPSTTLSPMVTAPVTSISVPATPPSVVSTTPQSNWISAPSPASFWNHGNFKPQKTLIIWSAAGGVSLLVFVSAIAFACFRNSKVVTVKPWATGLSGQLQKAFVAGVPNLRRAEIQAACEYFSNIIGSIPNGTVYKGTLSSGVEIAVASSAVTSSKNWSKTMEAQFRKKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRVRIAMAIAYCLEHMHQLEPPISLRNLQSSSIYLTEDYAAQLSDLAFWNDMAASRKISDSAATQLLEPPSTYIKSNVYSFGIILFEMITGRIHCDEENGFLAQYLERGHPLRDMVDPTLNSVEPEEIEKWWEVVKECVHSEAERRPSMREVAGRLKEITGMGPEGATPKLSPLWWAELEIMSTDSS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0346 541 MobiDBLite consensus disorder prediction 79 132 - -
Bisa09g0346 541 Pfam Protein tyrosine and serine/threonine kinase 255 509 IPR001245 GO:0004672|GO:0006468
Bisa09g0346 541 MobiDBLite consensus disorder prediction 89 115 - -
Bisa09g0346 541 Gene3D Transferase(Phosphotransferase) domain 1 335 517 - -
Bisa09g0346 541 PANTHER PROTEIN MALE DISCOVERER 2 81 538 - -
Bisa09g0346 541 SUPERFAMILY Protein kinase-like (PK-like) 247 510 IPR011009 -
Bisa09g0346 541 FunFam Inactive receptor-like serine/threonine-protein kinase 225 333 - -
Bisa09g0346 541 ProSiteProfiles Protein kinase domain profile. 251 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0346 541 Gene3D Phosphorylase Kinase; domain 1 227 333 - -
Bisa09g0346 541 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0346 Bisa-ChrBisa09 4931627 4935653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0346 237 512 Receptor kinase-like Gene Family AT3G19300 33.667 3.80e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bisa09g0346 PK_Tyr_Ser-Thr 1.3e-24 CL0016