Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0338 ATGAACTTCCTGTTGCTGGAGCTATGTACATGGGGAAAGGTTACATGGAAGGCGAGGGTGGGAAAGAAAAATGGATTGGAGTTGCAGGCAGCATGGGAAAATGAAGATGAAAATGAAGGGTCAACAAAGAGAGAAAGAGAGTCTCACTTCTTCACTCTTCAACCTTTCTTCTCCCCACCGGAGTTCTCAACTTTTCAGTTCTTCTCAATGTCCCCTCAATCAGACTCCCGCCTCACCCCTCTCACTCAGATGCTTCAGTCCATTTTCTCCGACAACAGCAACATCATGCTCGCCGCCATCATCTCTCTCCTCCTCGTCATCCTCTTCGTCCTCCTCCTCCACCTCTACGCCAAATGGTTCCTCGCCCACGCCCACGCCCGGTCCCGCCGCCGCCGCCCCACCGTCTCCGTCTCCGACGTTCTCGGGCCTCCCCGCTTCCACCACTTCCACACCTTCAATCTGCAGGACTCCCCCTCTTCCAATTCCCCCTCCAAAGGGCTCGACTCCGCCGCCATTGCCGCCATCCCTGTTTTCGTATACGCAGAAACAGGGGATAGGGATAAAGAACAGAGGAAGAAGGAGCACGAATCGGAATGCGTGATTTGCCTGAGCGCTTTTGTGGACGGAGAAATCGGAAGGAGCTTGCCCAAGTGCGGTCACGCCTTCCATGTGGAGTGCATCGACATGTGGCTGACTTCGCATTCCAGTTGCCCCATTTGCAGGGCTCCGATTGCGGGTGGGATCGTCGAGCACGATTCTCAGACCGATGATTCCTCTGGTGTTCTTGAGATTGTGGTTGATTCTCACATCTCTGAGACCAGCGAGAATGAGCATGGGAATGAGGGTAGTGCTAATAACAGTGGCAATGACAATGGAGGGGTAAGTGATAATTCAGCCGTTTCTGTATCAGAAACCTCGTCCTCATTGTTGGGCTGCTCCTTCAAGAGGATGCTCAGCAAAGTTTTTCCTTCTGCTAATGTTAATGAATTAAACCAATGA 999 0.5225 MNFLLLELCTWGKVTWKARVGKKNGLELQAAWENEDENEGSTKRERESHFFTLQPFFSPPEFSTFQFFSMSPQSDSRLTPLTQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHARSRRRRPTVSVSDVLGPPRFHHFHTFNLQDSPSSNSPSKGLDSAAIAAIPVFVYAETGDRDKEQRKKEHESECVICLSAFVDGEIGRSLPKCGHAFHVECIDMWLTSHSSCPICRAPIAGGIVEHDSQTDDSSGVLEIVVDSHISETSENEHGNEGSANNSGNDNGGVSDNSAVSVSETSSSLLGCSFKRMLSKVFPSANVNELNQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0338 332 MobiDBLite consensus disorder prediction 271 300 - -
Bisa09g0338 332 MobiDBLite consensus disorder prediction 277 300 - -
Bisa09g0338 332 Pfam Ring finger domain 198 241 IPR001841 -
Bisa09g0338 332 ProSiteProfiles Zinc finger RING-type profile. 199 241 IPR001841 -
Bisa09g0338 332 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 75 251 - -
Bisa09g0338 332 SMART ring_2 199 240 IPR001841 -
Bisa09g0338 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 246 IPR013083 -
Bisa09g0338 332 SMART FANCL_C_2 195 249 - -
Bisa09g0338 332 FunFam RING-H2 finger protein ATL1 154 246 - -
Bisa09g0338 332 SUPERFAMILY RING/U-box 191 244 - -
Bisa09g0338 332 CDD RING-H2_EL5-like 198 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0338 Bisa-ChrBisa09 4879166 4881986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0338 89 242 Rapid Response to Elicitors AT3G16720 38.312 8.29e-29 111