LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g0333	ATGAATCCCTCCGAGCAATATGTGGAACATGGAGTATCTCACCAGAATTTAAAGAGGACATCTTGTGCAACTGTGCTCACTCTGGCTTATCAAAGTCTTGGAGTGGTTTATGGTGACCTCAGTACCTCCCCACTTTATGTTTACAAGACCACCTTCTCGGGGAAACTGAGCCTCAAAGAAGATGATGAGGAAATATTTGGGGTGCTTTCATTTATATTCTGGACTTTCACTGTCATTGCTCTGTTCAAATATGTATTCATTGTGATGTCCGCTGATGACAATGGGGAAGGAGGTTCATTTGCATTATATTCTCTTCTTTGCCGACATGCAAGATTAAGCATATTACCTAATCAACAGCCGACCGATGAGAATTTGGCTGCTTATGCCACAGAAGACTCCGCAGACACCTGGCAGTCTGCTCTCCTGAAGTCGTTCTTTGAAAAGCACCCAAGGTTCCAGAAAGGACTGCTCATATTTGTTCTGCTGGGAACCTGTATGGCAATTGGAGACGGTGTAATCACTCCCGCGATATCAGTTCTTTCAGCAGCTTCAGGAGTTAAAGTTAAAATCAGTCAACTCCATGACAATTATGTGGTTATAATCTCATGTGTCATTCTAGTGTGCCTCTTCTCCATTCAGCATCATGGAACACATAAAGTTGCTTTCTTGTTTGCCCCAGTCGTTGCAGCTTGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATTATCCACTGGAACCCCCAGATATATCATGCACTCTCTCCAGTTTACATGTTGAGGTTCCTCAGGTCCACAGGCATTGAAGGATGGCTTTCACTGGGGGGAGTGGTTCTTTCAATCACAGGTGTGGAGACAATGTTTGCTGACATGGGTCATTTTTCTGCACTCTCAATAAAGATAGCCTTCACATGTCTAGTATATCCCTGCCTCATTTTAGCATATATGGGCGAGGCTGCCTTCCTCTCCAAGCATCATGATGACATTCAGAGAAGTTTTTACAAGGCCATACCAGAAACTGTGTTTTGGCCAGTGTTCATAGTGGCCACTTTTGCAGCTGTTGTAGGAAGTCAAGCAGTAATTTCTGCTACTTTTTCCATCATAAGCCAGTGTTGTGCATTGAATTGTTTTCCTCGGGTGAAGATTATCCATACTTCAAAAAGAATTTATGGGCAGATATACATCCCAGAAGTCAATTGGATATTGATGTGTCTTTCTCTAGCTGTCACAGTTGGCCTTAGGGATACAAACATGATTGGTCATGCATATGGATTGGCGGTCACCACTGTTATGTTTGTGACAACATGCTTGATGACACTGGTGATTGTGATGGTGTGGAAGCAAGGAATTGTGAAAGCCATCACATGTTTGCTCTTGTTTGGATCAATAGAACTGCTGTACATTTCTGCTTCAATCAGCAAGGTCCCTGAAGGAGGGTGGATCCCGCTTGTGCTATCTTTTATCTTCATGGGTATAATGTACACTTGGAACTATGGAACAATGAAGAAACACGAATTTGATGTGGAGAACAAGGTTTCAATGAGCAGGATACTATCCTTAGGACCTTGCCTAGGTATAGTCCGTGTCCCCGGCGTAGGACTCATTTACACTGATCTGGCTTCTGGGGTCCCTGCCATCTTTGGCCATTTTGTCACAAACTTGCCAGCATTCCATAAAGTGCTAGTTTTTGTCTGTGTCAAATCTGTTCAAGTCCCTTATGTTACTGAGAACGAACGGATGCTCATCAGTCGGGTTGGCCCGAAGGAATATGGTATGTTTCGCTGCATTGTCAGGTATGGTTACAAGGATCTGCAGCAAGAGAACTATAATTTTGAGAATAAGTTACTGTCTGGGATAGTACAATTTGTAGAAACTGAGGAGACAGATGAATTGTCTACAGATGTTGGAAACTCATATTGTGAAGAGAACTTGTTTCCATCTTCAAGTCGTTTGCGGGGGGTGAAGGATAATAATGATGGCCGTCTTGAAGAGTCTGTTTGTAAAGAAGAGTCTCTGCAGATTCTGAAAGCCAAGGAGTCTGGTGTTGCCTATATACTTGGGCATTCCCATGCAAAGGCAAAGAAATCATCATCCATCTTGAAGAAACTCGCAATAGATGTTGTTTTTGCTTTCATGAGCAAGAATTGCAGAGAGCCTGATGTTGTTCTGAACGTGCCTTATACTTCTTTGCTGGAGGTTGGTATGGTCTACTATGTCTAA	2220	0.4284	MNPSEQYVEHGVSHQNLKRTSCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLKEDDEEIFGVLSFIFWTFTVIALFKYVFIVMSADDNGEGGSFALYSLLCRHARLSILPNQQPTDENLAAYATEDSADTWQSALLKSFFEKHPRFQKGLLIFVLLGTCMAIGDGVITPAISVLSAASGVKVKISQLHDNYVVIISCVILVCLFSIQHHGTHKVAFLFAPVVAAWLLCISGIGIYNIIHWNPQIYHALSPVYMLRFLRSTGIEGWLSLGGVVLSITGVETMFADMGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHDDIQRSFYKAIPETVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPRVKIIHTSKRIYGQIYIPEVNWILMCLSLAVTVGLRDTNMIGHAYGLAVTTVMFVTTCLMTLVIVMVWKQGIVKAITCLLLFGSIELLYISASISKVPEGGWIPLVLSFIFMGIMYTWNYGTMKKHEFDVENKVSMSRILSLGPCLGIVRVPGVGLIYTDLASGVPAIFGHFVTNLPAFHKVLVFVCVKSVQVPYVTENERMLISRVGPKEYGMFRCIVRYGYKDLQQENYNFENKLLSGIVQFVETEETDELSTDVGNSYCEENLFPSSSRLRGVKDNNDGRLEESVCKEESLQILKAKESGVAYILGHSHAKAKKSSSILKKLAIDVVFAFMSKNCREPDVVLNVPYTSLLEVGMVYYV	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g0333	739	Pfam	K+ potassium transporter	30	603	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa09g0333	739	NCBIfam	potassium uptake protein	28	739	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa09g0333	739	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	18	738	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g0333	Bisa-ChrBisa09	4793520	4797986	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g0333	122	739	Inorganic Solute Cotransporters	AT2G30070	71.845	0.0	919