Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0330 ATGACTTGCTCCGTCGTTCTCCCCAATTCGCCGGCCTTCTCTCCCTCCTCTTCTCTCTTCTGCAACAAAATCAACCCTCTCATCTCTCCTTCCTCCGATTCTCTCTCCCTCTCTCTCCCCCACCTTCAGCCTCAACCCCCTCCCTCTCCTCCTCCTTCCCCCTTTCGCCTCTTCAACCCCCCAATCGGGCTTTCCGATTCGCCTTCCACTTCCGCTCCTTCATCGTCTACCTCCCCCACCAGCTCCTTCCTGAAGAGGAAGAGACCCGCCAGGCTGGATATTCCCGTTGCGTCTCTCACTTTTGGAGCTTTTGGGGCTCCCGTGACGCCGTCTGCGGCTGCTCGGGATTTCGTCGAGGTAGAAGGACACGGGTATTCTGTGTATTGCAAGAGGGGAAGGCGAGCCTACATGGAGGATCGTTACTCGGCTGCCGTTGATCTTCAAGGACAATCCAAGCAGGCTTTCTTCGGGGTATTTGATGGGCATGGAGGATCAAAAGCTGCGGAATTCGCTGCTCTGAACTTAGAAAAAAATGTCATGAAAGAGGTGACAAGGAGGAGTGACGAAGATGATGACATGGAGGAGGCCGTGAAGCATGGCTACCTCACCACAGATTCTGAGTTCCTTAAAGAGGACATCGGAGGTGGTTCTTGCTGTGTAACAGCACTCATCAGGAACGGCAACCTCATTATCTCCAATGCTGGCGATTGCCGTGCCGTCATTTGCAGAGGCGGCACCGCCGAGGCCCTCACATCCGACCACCGCCCTTCAAGGAAAGACGAGAGAGACAGAATTGAAGCTCTGGGTGGTTATGTTGATCTATGCCGGGGTGTTTGGAGGGTCCAGGGATCTCTGGCTGTGTCCCGAGGTATTGGAGACAGACACCTGAAGCAATGGGTGACAGCAGAACCTGAGACTGAAGTTATCCAAATTGAACCTGATCATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTACTAACCAGGAAGCAGTAGATATTGCTCGTTCTTTCTGTACAGAGAGTGATAGACCACAGCCATTGCTGGCCTGTAAAAACCTCGTAGATTTGTCCGTGTCACGAGGCTCTTACGATGATATTAGTGTGATGCTAATCAAGTTGGATAACTATGTATGA 1146 0.5175 MTCSVVLPNSPAFSPSSSLFCNKINPLISPSSDSLSLSLPHLQPQPPPSPPPSPFRLFNPPIGLSDSPSTSAPSSSTSPTSSFLKRKRPARLDIPVASLTFGAFGAPVTPSAAARDFVEVEGHGYSVYCKRGRRAYMEDRYSAAVDLQGQSKQAFFGVFDGHGGSKAAEFAALNLEKNVMKEVTRRSDEDDDMEEAVKHGYLTTDSEFLKEDIGGGSCCVTALIRNGNLIISNAGDCRAVICRGGTAEALTSDHRPSRKDERDRIEALGGYVDLCRGVWRVQGSLAVSRGIGDRHLKQWVTAEPETEVIQIEPDHDLLILASDGLWDKVTNQEAVDIARSFCTESDRPQPLLACKNLVDLSVSRGSYDDISVMLIKLDNYV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0330 381 MobiDBLite consensus disorder prediction 33 86 - -
Bisa09g0330 381 SMART PP2C_SIG_2 120 377 IPR001932 -
Bisa09g0330 381 SMART PP2C_4 112 375 IPR001932 -
Bisa09g0330 381 CDD PP2Cc 124 377 IPR001932 -
Bisa09g0330 381 Pfam Protein phosphatase 2C 125 370 IPR001932 -
Bisa09g0330 381 FunFam probable protein phosphatase 2C 25 117 380 - -
Bisa09g0330 381 ProSiteProfiles PPM-type phosphatase domain profile. 124 377 IPR001932 -
Bisa09g0330 381 PANTHER PROTEIN PHOSPHATASE 2C 82 375 IPR015655 GO:0004722|GO:0006470
Bisa09g0330 381 MobiDBLite consensus disorder prediction 63 84 - -
Bisa09g0330 381 Gene3D - 123 380 IPR036457 -
Bisa09g0330 381 SUPERFAMILY PP2C-like 122 379 IPR036457 -
Bisa09g0330 381 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
Bisa09g0330 381 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0330 Bisa-ChrBisa09 4732287 4733944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0330 1 381 PP2C-type Phosphatase Gene Family AT2G30020 60.100 2.00e-157 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0330 09 4732287 4733944 Bisa05g2890 05 69340026 69341942 CCT
Bisa09g0330 09 4732287 4733944 Bisa09g0330 09 4732287 4733944 ECH
Bisa09g0330 09 4732287 4733944 Bisa05g2890 05 69340026 69341942 ECH