Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0327 ATGGCGGTGGAGGATTTGAAGTACTATGGGAGGAGAAAGCGCAAAAGAGGGTATGGAAAAAGAAAACTTGTCGTCAATGAGAGAGTGGAGGTGAGGAGTGTGGAAGAGGGCTTCTTGGGTTCATGGCACCCAGGGACTGTTATTCAATGTGGGAAGCAGACGCGTCATGTCAAATATGACAATGTTTTAGATGATAATGGGTCAAATTATCTTGTTGACGTAGTGGTTGTTCCAGCTGTTTTGGATGGCGCTAGTTCTACAATTTGCAATGAACGTGGAGTCATTAGACCACTGCCTCCTTTGAAGGAGTTTGGGAGATGGGACCTTCCATTTGGTCTCTGCGTTGATGTAAGCTATCAAGAAGCTTGGTGGGAAGGTGTTATTTTTGATCACTGTGATGGGATGGAGGAGAGATGCGTATTCTTTCCAGATTTGGGTGATGAAATGAAGATTGGAATTGGCGAGTTGCGCATTACTCATGACTGGAATGAAGTTATAGAGGATTGGGTGCGACGGGGGATGTGGGTATTTCTTGAATTGATTGAGGAGTGTGAACAGGATACTTATGTTGCAGTTTCGGTAAAGCAAATCTGGTATGATATACGGGCAAAAAAAGGTTTCGATAAGATTAGGGACTGGACTTGTAACGTGAAAGATTTGTGGAGAGTTTTGGTATTTGAGGTAGTTAATAACTACTATAAACTTACACTAAAAGAAGTTTTCCGATCCTTAGATCTTTCAAAAGGTTTCTTGACAGAAGCATTAGAGTCAGGTGAACCTGCTAATCTGAAAGGTGATACTGCCAACTTTCCTTCTGTTGTAAATTCCAACAATCAACCAAATAGCAAATCAAATGTTCATTATGATGCTGGTCCAAGTAATTTATCCAGCTCTGACATTATATTGTTTGAGAGCCGTGAGAAAGATGGTGACTTGTCAAACTTCTTGGATGCTAATCAAAACAGCGGTGGAATCATTCTTACCCAGGAGAAATATGATATGCAGCCTTTTGGGGATGGAGCATCAAATATGCATATTACTGAAGAATTAAATGTGTCCTTCTCTGTGAAGGAGGTCGTGGTGCTGAAAGAATCTGTTTTACCAGTTCAAGAGGTCTTAGCAGATACTCCAGAAGGAAATTACTGCTGTGATGCTGGTTCTGCTGGTGAAGAAGAGTTGAGTGCTACCTTTTATGAAAAAAATAGACAACAGTCATGCTCAACACGCAAAAGTTCCTTACATTGGCAACCTCTGATACTTTCCGGAGTTGAATTTAGCCCTGATGCTGTTAATCAATATGCACTTGCATCTAAAAGGAAGATCAGGGAACGACTGAAGACAAAAGTCATAAAACATCTTGCATATCTTGGATGGAAAATTGAGTGGACAAAATCTAACGTCTGCAATCCTCAATCTCTGCGATACAGGTACATCTCTCCTGATAAACAGGAAATTTATTTGTCACTTTGTCAAGTTTGTGAACATATAAAAAAAGACAACAATATGGACTCTTTGTTGTCCCAAGATGATCAGAGAAGGATGAATCCTCCAGTTGACAGTTATATTTCACGTTGTGGAATTTTGCCACCTTCTCCTTCTGTTGTAGATGTACTTGAACCTGAATTCTGTCCTGAAGCTGTTATGAAGTATTACTTACATGCATTAGAGAAGGGCCAAAAGGCTGATAAAAAAAGTATGATACTAAAAGCAAGAAAGCACCTGTTGGCAGCAGGATGGAATTTTGACTACCCAGCTGAAAGAGGAAGGAGAAGGAGTTTGACCTACAGGTCGCCACAAAATCAGTGTTTTGGCTCACTTCGAGTAGCTTGCAAGGCATATATTGAAGAATGTCTTCCTCAGTGGATAAGTTCTAGCATGATACCTCTAGATGTTTTGGGCATAAGTAAGGTGAATATGAGTCAGATTGATAGTGATAAATTATTATACTGTGTATCCCAATTGCTTCAAAAGAAACCCGAATTACATAATGTAAATGGAGTACCAGCAAATAGATCAATTGGGAATTGCAAGCTCAAAGGCTCGAGGAATTTAAAGTCCAGCCTACCCAAAATCCAGAGAAAAGGATTACCTATTCGGTTACTAAGATCAAGCAAAAGGGTGCAGAAGGTGTGTGCTCCTTGTTCATCATACCAGAAACCCCAAAATGTCCTGTCTTGGTTAATAGACTGCAATGTGGTGTTACCGAGGTCCAAGGTCCACTACCGAGCAAGAGGATCATGCCGTCCCATGGCTGAGGGGCGAATAACTCATGATGGAATTAAGTGTAGCTGTTGTCAGAAGGTATATAGTCTTGGGGGCTTTGAAGGTCATGCTAATGCTAATGGCCGTAGTAATCGCAGACCCGCTGCTGCTAGTATCTTTCAGGAAAATGGCAAGTCACTCCTTGATTGCCAAATGCAATTAATGCATGATCAAAGGAGAAGAGAAACTGCAAAAAAACTATTAAAGGGTGCATATCAAACTGAGAATGACTTCATTTGTTCTGTTTGTCACTATGGTGGTGAACTGATTTTATGTGATCAATGTCCATCCTCTTTTCATAAGAGCTGTCTAGGTCTGGAGGACGTCCCTGAAGGTGATTGGTTTTGTCCATCATGTCGTTGTGGGATTTGTGGCCAAAGTAAACTTGAAGAGGTTGAGGATGGAAATATCCTTACTTGCATTCAGTGTGAACGTAAATATCACGCTAACTGCCTGAGCAGAAGGTCTGTAGATAAGTCTAGAAGATTTCTGGAAAATTGGTTCTGTGGAAAAAGCTGTGAAAAGATATATGCAGGTCTCCATAAGCTATTAGGACAACCTGTTGCAGTGGGTATGAACAATTTAAGTTGGACGTTGCTGAAGTGTGTTAACTCTGAGGGTTGCGATCTTGGTAGCACTAAAAATGACTTATTGGTAGAGAGTTACAGCAAACTCAGTGTTGCTCTTTCAGTGATGCATGAATGTTTTGAGCCCTTAAAGGAAATTTATTCTGGCAGGGATCTCATGGAAGATGTTCTTTTCAGCAAAAGGTCACAGCTTAATCGGTTGAACTTCCAGGGTTTCTATACTGTAATTCTGGAGAGAAATGAAGAACTGATAAGTGTGGCTACAGTTAGGGTCTATGGAGAGAAGGTAGCAGAAGTGCCTCTTGTTGGTACCAGATTTCAGTATCGCCGACTTGGAATGTGTCGCATTTTAATGGATGAGCTTGAAAAGAGGCTCATGCAACTAGGAGTGGAGAGGCTTGTTTTGCCTGCTGTTCCCAGTGTGCTAGAAACGTGGACAACTTCTTTTGGCTTTGCAAAGATGACAAATTCTGAGAGATCACAGTTTCTGGACTATACTTTCCTTGACTTCCAGGATACCATCATGTGCCAGAAGCTTTTGACCAAGACCCCTCAAGATATAGTTTTGTCAACAGAGATTCAGCCCAAGCCACCTGATGTTTTATCTGTAAGTGGCAGTACTGTTTTTGATCAGTCCAGCTCAGTGTCTGAAGTATATCAAGAAGAAGAGATTGACAAAAGTGGGATGCTGGATCTAAATATGGCGGATACTTTTGCTGGCAATAGTTATCGTCTTGGTAATGTTGCTGTTGATCCAGACCCAGTTGCCATGGCACTTCCATCTCTGCCTCCTAATTATTACACTGGGAAGCAGGCAACTTTTCAAGGCAAACAGTTAGAGAATGGAACCAGTCCAGAATGCTCACTTGAAGATGAACATGTTGCCATGTATAAAGGCGCATGTAAGTACTACAAACGAAGGAAAACTACCAGGGCATGA 3789 0.4125 MAVEDLKYYGRRKRKRGYGKRKLVVNERVEVRSVEEGFLGSWHPGTVIQCGKQTRHVKYDNVLDDNGSNYLVDVVVVPAVLDGASSTICNERGVIRPLPPLKEFGRWDLPFGLCVDVSYQEAWWEGVIFDHCDGMEERCVFFPDLGDEMKIGIGELRITHDWNEVIEDWVRRGMWVFLELIEECEQDTYVAVSVKQIWYDIRAKKGFDKIRDWTCNVKDLWRVLVFEVVNNYYKLTLKEVFRSLDLSKGFLTEALESGEPANLKGDTANFPSVVNSNNQPNSKSNVHYDAGPSNLSSSDIILFESREKDGDLSNFLDANQNSGGIILTQEKYDMQPFGDGASNMHITEELNVSFSVKEVVVLKESVLPVQEVLADTPEGNYCCDAGSAGEEELSATFYEKNRQQSCSTRKSSLHWQPLILSGVEFSPDAVNQYALASKRKIRERLKTKVIKHLAYLGWKIEWTKSNVCNPQSLRYRYISPDKQEIYLSLCQVCEHIKKDNNMDSLLSQDDQRRMNPPVDSYISRCGILPPSPSVVDVLEPEFCPEAVMKYYLHALEKGQKADKKSMILKARKHLLAAGWNFDYPAERGRRRSLTYRSPQNQCFGSLRVACKAYIEECLPQWISSSMIPLDVLGISKVNMSQIDSDKLLYCVSQLLQKKPELHNVNGVPANRSIGNCKLKGSRNLKSSLPKIQRKGLPIRLLRSSKRVQKVCAPCSSYQKPQNVLSWLIDCNVVLPRSKVHYRARGSCRPMAEGRITHDGIKCSCCQKVYSLGGFEGHANANGRSNRRPAAASIFQENGKSLLDCQMQLMHDQRRRETAKKLLKGAYQTENDFICSVCHYGGELILCDQCPSSFHKSCLGLEDVPEGDWFCPSCRCGICGQSKLEEVEDGNILTCIQCERKYHANCLSRRSVDKSRRFLENWFCGKSCEKIYAGLHKLLGQPVAVGMNNLSWTLLKCVNSEGCDLGSTKNDLLVESYSKLSVALSVMHECFEPLKEIYSGRDLMEDVLFSKRSQLNRLNFQGFYTVILERNEELISVATVRVYGEKVAEVPLVGTRFQYRRLGMCRILMDELEKRLMQLGVERLVLPAVPSVLETWTTSFGFAKMTNSERSQFLDYTFLDFQDTIMCQKLLTKTPQDIVLSTEIQPKPPDVLSVSGSTVFDQSSSVSEVYQEEEIDKSGMLDLNMADTFAGNSYRLGNVAVDPDPVAMALPSLPPNYYTGKQATFQGKQLENGTSPECSLEDEHVAMYKGACKYYKRRKTTRA 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0327 1262 ProSiteProfiles Zinc finger PHD-type profile. 831 876 IPR019787 -
Bisa09g0327 1262 Pfam PHD-finger 833 875 IPR019787 -
Bisa09g0327 1262 SMART agenet_At_2 107 164 IPR014002 -
Bisa09g0327 1262 SMART agenet_At_2 21 82 IPR014002 -
Bisa09g0327 1262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 876 930 IPR013083 -
Bisa09g0327 1262 Gene3D - 990 1118 - -
Bisa09g0327 1262 SUPERFAMILY FYVE/PHD zinc finger 819 874 IPR011011 -
Bisa09g0327 1262 SUPERFAMILY FYVE/PHD zinc finger 875 933 IPR011011 -
Bisa09g0327 1262 Pfam Tify domain binding domain 753 808 IPR032308 -
Bisa09g0327 1262 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1011 1114 IPR016181 -
Bisa09g0327 1262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 825 875 IPR013083 -
Bisa09g0327 1262 Pfam Agenet domain 27 100 IPR008395 -
Bisa09g0327 1262 CDD NAT_SF 1025 1085 - -
Bisa09g0327 1262 SMART PHD_3 875 927 IPR001965 -
Bisa09g0327 1262 SMART PHD_3 833 874 IPR001965 -
Bisa09g0327 1262 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 985 1130 IPR000182 GO:0016747
Bisa09g0327 1262 PANTHER PHD FINGER PROTEIN 12 544 1169 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0327 Bisa-ChrBisa09 4666537 4676902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0327 32 248 PHD Transcription Factor Family AT5G58610 46.637 4.63e-59 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa09g0327 Agenet 1.2e-14 CL0049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0327 09 4666537 4676902 Bisa09g0327 09 4666537 4676902 ECH